################################################################################################
# Program: MUSTANG v0.1: A Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, P. J. Stuckey, J. C. Whisstock, and A. M. Lesk
# Rundate: Tue Aug 23 19:08:52 2005
# Report_file: results.html
################################################################################################
#====================================
# Aligned_structures: 4
# 1: 1ADJ.pdb
# 2: 1ATI.pdb
# 3: 1HC7.pdb
# 4: 1QF6.pdb
#
# Length: 896
# Identity: 11/896 ( 1.2%) (Calculated as the percentage of conserved columns in the alignment.)
# Similarity: 49/896 ( 5.5%) (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps: 607/896 ( 67.7%) (Calculated as the percentage of columns with atleast one gap.)
#===========================================ALIGNMENT START=========================================
1ADJ.pdb 1 ------T----------------------------------------------------- 1
1ATI.pdb 1 -------AAS-------------------------------------------------- 3
1HC7.pdb 1 KGLTPQ--SQ-------------------------------------------------- 8
1QF6.pdb 1 PVITLP--D-GSQRHYDHAVSPMDVALDIGPGLAKACIAGRVNGELVDACDLIENDAQLS 57
1ADJ.pdb ------------------------------------------------------------
1ATI.pdb ------------------------------------------------------------
1HC7.pdb ------------------------------------------------------------
1QF6.pdb 58 IITAKDEEGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVIDNGFYYDVDLDRTLTQEDVE 117
1ADJ.pdb ------------------------------------------------------------
1ATI.pdb ------------------------------------------------------------
1HC7.pdb ------------------------------------------------------------
1QF6.pdb 118 ALEKRMHELAEKNYDVIKKKVSWHEARETFANRGESYKVSILDENIAHDDKPGLYFHEEY 177
1ADJ.pdb ------------------------------------------------------------
1ATI.pdb 4 --------------------------------------------------------SLD- 6
1HC7.pdb 9 -------------------------------------------------------DFSE- 12
1QF6.pdb 178 VDMCRGPHVPNMRFCHHFKLMKTAGAYWRGDSNNKMLQRIYGTAWADKKALNAYLQRLEE 237
1ADJ.pdb 2 -----------------------ARAVRGTKDLFGKELRMHQRIVATARKVLE-AA-GAL 36
1ATI.pdb 7 ----ELVALCKRRGFIFQS-SEIYGGLQGVYDYGPLGVELKNNLKQAWWRRNVYERDDME 61
1HC7.pdb 13 ----WYLEVIQKAELADYG------PVRGTIVVRPYGYAIWENIQQVLDRMFK-ET-GHQ 60
1QF6.pdb 238 AAKRDHRKIGKQLDLYHMQE-----EAPGMVFWHNDGWTIFRELEVFVRSKLK-EY-QYQ 290
G g e
1ADJ.pdb 37 ELVTPIFEETQVFEKGVGAA-TDIVR--------------KEMFTFQ------D-RG--- 71
1ATI.pdb 62 GLDASVLTHRLVLHYSG-H-EAT-F-ADPMVDNWTPPRYFNMMFQDL------RGPRGGR 111
1HC7.pdb 61 NAYFPLFIPMSFL-----------FS--------------PELAVVTHAGGEEL------ 89
1QF6.pdb 291 EVKGPFMMDRVLWEKTG-H-WDN-YK--------------DAMFTTS------S--E--- 322
p mf
1ADJ.pdb 72 GRSLTLRPEGTAAMVRAYLEHGMKV---------WPQPVRLWMAGPMFRAERP-----QK 117
1ATI.pdb 112 GLLAYLRPETAQGIFVNFKNV----L-D---ATSRKLGFGIAQIGKAFRNEIT--PRNFI 161
1HC7.pdb 90 EEPLAVRPTSETVIGYMWSKW----I-RSWR----DLPQLLNQWGNVVRWEMR--T-RPF 137
1QF6.pdb 323 NREYCIKPMNCPGHVQIFNQG-----LKSYR----DLPLRMAEFGSCHRNEPSGSL-HGL 372
rP lp G R E
1ADJ.pdb 118 GRYRQFHQVNYEALGS-E-NPI-LDAEAVVLLYECLKELGLRRLKVKLSSVGDPE-DRAR 173
1ATI.pdb 162 FRVREFEQMEIEYFVRPG-EDEYWHRYWVEERLKWWQEMGLSR-ENLVP--YQ------- 210
1HC7.pdb 138 LRTSEFLWQEGHTAHATREEAEEEVRRMLSIYARLARE-Y-------AA--IPV------ 181
1QF6.pdb 373 MRVRGFTQDDAHIFCTEE-QIRDEVNGCIRLVYDMYSTFGFEKIVVKLS--TRPEK---- 425
R r F q e g
1ADJ.pdb 174 YNAYLREVLSPHREAL-SEDSKERLEENPMRILDSKSERDQALLKELGVRPMLDFLGEEA 232
1ATI.pdb ------------------------------------------------------------
1HC7.pdb ------------------------------------------------------------
1QF6.pdb 426 -------------RIGS---------------------------------------DEMW 433
1ADJ.pdb 233 RAHLKEVERHLERLSVPYELEPALV-RGLDYYVRTAFEVHHEEIGAQ----SALGGGGRY 287
1ATI.pdb 211 ------------------QPP-ESSAHYAK--ATVDILYR-FP----H-GSLELEGIAQR 243
1HC7.pdb 182 --------------IEGLKTE-KEKFAGAV--YTTTIEAL-MK----DGKALQAGTSHYL 219
1QF6.pdb 434 DRAEADLAVALEENNIPFEYQLGEGAFYGP--KIEFTLY--DC----LDRAWQCGTVQLD 485
g
1ADJ.pdb 288 DGLSE-LLG-------------------------------GPRVPGVGFA--FGVERVAL 313
1ATI.pdb 244 TDFDLGSHTKDQEALGITARVLRNEHSTQRLAYRDPETGKWFVPYVIEPS--AGVDRGVL 301
1HC7.pdb 220 GENFARAFD---------------------I-KFQDRDLQVKYVHTTSWG--LSW-RFIG 254
1QF6.pdb 486 FSLPSR-LS---------------------A-SYVGEDNERKVPVMIHRAILGSMERFIG 522
R
1ADJ.pdb 314 ALEAEGFGLP---------------EE-KGPDLYLIPLT------E-EAVAEAFYLAEAL 350
1ATI.pdb 302 ALLAEAFTREELPNGEERIVLKLKPQ-LAPIKVAVIPLV----KNRPEITEYAKRLKARL 356
1HC7.pdb 255 AIIMTHGDDR---------GLVLPPR-LAPIQVVIVPIYKDES--RERVLEAAQGLRQAL 302
1QF6.pdb 523 ILTEEFA-------------GFFPTW-LAPVQVVIMNIT------D-SQSEYVNELTQKL 561
al e ap v p e a L L
1ADJ.pdb 351 RP-RLR-AEYALAP-RKPAKGLEEALKRGAAFAGFLGEDELR---------AGEVTLKRL 398
1ATI.pdb 357 LALGLGRVLYED-T-GNIGKAYRRHDEVGTPFAVTVDYDTIGQSKDGTTRLKDTVTVRDR 414
1HC7.pdb 303 LAQGLR-VHLDDRDQHTPGYKFHEWELKGVPFRVELGPKDLE---------GGQAVLASR 352
1QF6.pdb 562 SNAGIR-VKADLRN-EKIGFKIREHTLRRVPYMLVCGDKEVE---------SGKVAVRTR 610
glr v g e g pf g g v r
1ADJ.pdb 399 ATGEQVRLSREEVPGYLLQALG-------------------------------------- 420
1ATI.pdb 415 DTMEQIRLHVDELEGFLRERLR-----W-------------------------------- 437
1HC7.pdb 353 L-GGKETLPLAALPEALPGKLDAFHEE-LYRRALAFREDHTRKVDTYEAFKEAVQEGFAL 410
1QF6.pdb 611 RGKDLGSMDVNEVIEKLQQEIR-----SR--------------------------SLKQL 639
l e L l
1ADJ.pdb --------------------------------------------------------
1ATI.pdb --------------------------------------------------------
1HC7.pdb 411 AFHCGDKACERLIQEETTATTRCVPFEAEPEEGFCVRCGRPSAYGKRVVFAKAY-- 464
1QF6.pdb 640 ------------------------------------------------------EE 641
#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue = Acidic,{D,E}
# Magenta = Basic,{K,R} and
# Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
################################################EOF#################################################