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# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Sun Jul 24 05:21:36 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/zf-CCHH.html
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#====================================
# Aligned_structures: 15
#   1: 1ard.pdb
#   2: 1bboN.pdb
#   3: 1paa.pdb
#   4: 1sp1.pdb
#   5: 1sp2.pdb
#   6: 1zaa1.pdb
#   7: 1zaa2.pdb
#   8: 1zaa3.pdb
#   9: 1zfd.pdb
#  10: 1znf.pdb
#  11: 1znm.pdb
#  12: 2drp1.pdb
#  13: 2drp2.pdb
#  14: 3znf.pdb
#  15: 5znf.pdb
#
# Length:         91
# Identity:        0/ 91 (  0.0%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:      0/ 91 (  0.0%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           91/ 91 (100.0%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1ard.pdb                1  -------------------------------R-----------S-----FVCEVCTRAFA   13
1bboN.pdb               1  -------------------------------------------K-----YICEECGIRCK   12
1paa.pdb                1  -------------------------------K-----------A-----YACGLCNRAFT   13
1sp1.pdb                1  -------------------------------K-----------K-----FACPECPKRFM   13
1sp2.pdb                1  ------------------------------R--------PFMC-------TWSYCGKRFT   15
1zaa1.pdb               1  ---------------------------------R-----PYAC-------PVESCDRRFS   15
1zaa2.pdb               1  -------------------------------------------P-----FQCRICMRNFS   12
1zaa3.pdb               1  -------------------------------------------P-----FACDICGRKFA   12
1zfd.pdb                1  --------------------------------DR-----PYSC----DH---PGCDKAFV   16
1znf.pdb                1  -------------------------------------------------YKCGLCERSFV   11
1znm.pdb                1  -------------------------------------------------FQCTFCGKRFS   11
2drp1.pdb               1  ----------------------------------FTKEGEHT-------YRCKVCSRVYT   19
2drp2.pdb               1  ------------------------------N------------VK-V--YPCPFCFKEFT   15
3znf.pdb                1  ---------------------------------------------RP--YHCSYCNFSFK   13
5znf.pdb                1  KTYQCQYCEYRSADSSNLKTHIKTKHSKEK------------------------------   30
                                                                                       

1ard.pdb               14  ---RQEHLKRHYRSH-T-----N--EK----   29
1bboN.pdb              13  ---KPSMLKKHIRTH-T----DV--------   27
1paa.pdb               14  ---RRDLLIRHAQKI-H----S---G-NL--   30
1sp1.pdb               14  ---RSDHLSKHIKTH-Q----N---K---K-   29
1sp2.pdb               16  ---RSDELQRHKRTH-T----G-EK------   31
1zaa1.pdb              16  ---RSDELTRHIRIH-T----G-Q------K   31
1zaa2.pdb              13  ---RSDHLTTHIRTH-T----G---E----K   28
1zaa3.pdb              13  ---RSDERKRHTKIH-L----R---------   26
1zfd.pdb               17  RNHDLIRHKKSHQEKA---------------   32
1znf.pdb               12  ---EKSALSRHQRVH-K----N---------   25
1znm.pdb               12  ---LDFNLKTHVKIH-T----G---------   25
2drp1.pdb              20  ---HISNFCRHYVTS-H----K---R-----   34
2drp2.pdb              16  ---RKDNMTAHVKII-H--K-----------   29
3znf.pdb               14  ---TKGNLTKHMKSK-AHSKK----------   30
5znf.pdb                   -------------------------------     
                                                          


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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