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# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Sat Jul 23 04:41:59 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/ung.html
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#====================================
# Aligned_structures: 3
#   1: 1akz.pdb
#   2: 1udg.pdb
#   3: 1uuga.pdb
#
# Length:        238
# Identity:       80/238 ( 33.6%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:    155/238 ( 65.1%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           25/238 ( 10.5%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1akz.pdb                1  -M---------EFFGESWKKHLSGEFGKPYFIKLMGFVAEERKH-YTVYPPPHQVFTWTQ   49
1udg.pdb                1  --LDWTTFRRVFLIDDAWRPLMEPELANPLTAHLLAEYNRRCQT-EEVLPPREDVFSWTR   57
1uuga.pdb               1  L---------------TWHDVLAEEKQQPYFLNTLQTVASERQSGVTIYPPQKDVFNAFR   45
                                            W   l  E   Pyf  ll  va erq   tvyPP  dVF wtr

1akz.pdb               50  MCDIKDVKVVILGQDPYHGPNQAHGLCFSVQRPVPPPPSLENIYKELSTDIEDFVHPGHG  109
1udg.pdb               58  YCTPDEVRVVIIGQDPYHHPGQAHGLAFSVRANVPPPPSLRNVLAAVKNCYPEARMSGHG  117
1uuga.pdb              46  FTELGDVKVVILGQDPYHGPGQAHGLAFSVRPGIAIPPSLLNMYKELENTIPGFTRPNHG  105
                            c   dVkVVIlGQDPYHgPgQAHGLaFSVr  vppPPSL N ykel n ip f  pgHG

1akz.pdb              110  DLSGWAKQGVLLLNAVLTVRAHQANSHKERGWEQFTDAVVSWLNQNSNGLVFLLWGSYAQ  169
1udg.pdb              118  CLEKWARDGVLLLNTTLTVKRGAAASHSRIGWDRFVGGVIRRLAARRPGLVFMLWGTHAQ  177
1uuga.pdb             106  YLESWARQGVLLLNTVLTVRAGQAHSHASLGWETFTDKVISLINQHREGVVFLLWGSHAQ  165
                            Le WArqGVLLLNtvLTVragqA SH   GWe Ftd Vis lnq r GlVFlLWGshAQ

1akz.pdb              170  KKGSAIDRKRHHVLQTAHPSPLSVY-RGFFGCRHFSKTNELLQKSGKKPIDWKEL---  223
1udg.pdb              178  NAIR-PDPRVHCVLKFSHPSPLS--KVPFGTCQHFLVANRYLETRSISPIDWSV----  228
1uuga.pdb             166  KKGAIIDKQRHHVLKAPHPSPLSAH-RGFFGCNHFVLANQWLEQRGETPIDWMPVLPA  222
                           kkg  iD  rHhVLk  HPSPLS   rgFfgC HF  aN  Le rg  PIDW      


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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