################################################################################################
# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Sat Jul 23 09:25:40 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/squash.html
################################################################################################
#====================================
# Aligned_structures: 4
#   1: 1mcti.pdb
#   2: 1ppei.pdb
#   3: 2eti.pdb
#   4: 4cpai.pdb
#
# Length:         66
# Identity:        0/ 66 (  0.0%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:      0/ 66 (  0.0%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           66/ 66 (100.0%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1mcti.pdb               1  RI-CP------------------------------------RIWMECTRDSDCMAKCICV   23
1ppei.pdb               1  RV-CP----RILMECKKDSDCLA--E-CVCLEHG-YCG----------------------   29
2eti.pdb                1  --GCP------------------------------------RILMRCKQDSDCLAGCVCG   22
4cpai.pdb               1  -----HADPICNKPCKTHDDCSGAWFCQACWNSARTCGPYV-------------------   36
                                                                                       

1mcti.pdb              24  AGHCG-   28
1ppei.pdb                  ------     
2eti.pdb               23  PNGFCG   28
4cpai.pdb                  ------     
                                 


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
################################################EOF#################################################