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# Program: MUSTANG-Lite v0.1: A Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Sat Jul 23 04:04:58 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/planttoxin.html
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#====================================
# Aligned_structures: 3
# 1: 1gps.pdb
# 2: 1gpt.pdb
# 3: 1myn.pdb
#
# Length: 50
# Identity: 13/ 50 ( 26.0%) (Calculated as the percentage of conserved columns in the alignment.)
# Similarity: 38/ 50 ( 76.0%) (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps: 9/ 50 ( 18.0%) (Calculated as the percentage of columns with atleast one gap.)
#===========================================ALIGNMENT START=========================================
1gps.pdb 1 KICRRRSAGFKGPCM--SNKNCAQVCQQEGWGGGNCDGPFRRCKCI-RQC 47
1gpt.pdb 1 RICRRRSAGFKGPCV--SNKNCAQVCMQEGWGGGNCDGPLRRCKCM-RRC 47
1myn.pdb 1 ---DCLSGRYKGPCAVWDNETCRRVCKEEGRSSGHCSPSLKCWCEGC--- 44
rrrSagfKGPC sNknCaqVC qEGwggGnCdgplrrckc
#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue = Acidic,{D,E}
# Magenta = Basic,{K,R} and
# Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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