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# Program: MUSTANG-Lite v0.1: A Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Fri Jul 22 22:30:36 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/phosfruc.html
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#====================================
# Aligned_structures: 2
# 1: 1pfka.pdb
# 2: 4pfk.pdb
#
# Length: 320
# Identity: 173/320 ( 54.1%) (Calculated as the percentage of conserved columns in the alignment.)
# Similarity: 173/320 ( 54.1%) (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps: 1/320 ( 0.3%) (Calculated as the percentage of columns with atleast one gap.)
#===========================================ALIGNMENT START=========================================
1pfka.pdb 1 MIKKIGVLTSGGDAPGMNAAIRGVVRSALTEGLEVMGIYDGYLGLYEDRMVQLDRYSVSD 60
4pfk.pdb 1 -MKRIGVLTSGGDSPGMNAAIRSVVRKAIYHGVEVYGVYHGYAGLIAGNIKKLEVGDVGD 59
K IGVLTSGGD PGMNAAIR VVR A G EV G Y GY GL L V D
1pfka.pdb 61 MINRGGTFLGSARFPEFRDENIRAVAIENLKKRGIDALVVIGGDGSYMGAMRLTEMGFPC 120
4pfk.pdb 60 IIHRGGTILYTARCPEFKTEEGQKKGIEQLKKHGIQGLVVIGGDGSYQGAKKLTEHGFPC 119
I RGGT L AR PEF E IE LKK GI LVVIGGDGSY GA LTE GFPC
1pfka.pdb 121 IGLPGTIDNDIKGTDYTIGFFTALSTVVEAIDRLRDTSSSHQRISVVEVMGRYCGDLTLA 180
4pfk.pdb 120 VGVPGTIDNDIPGTDFTIGFDTALNTVIDAIDKIRDTATSHERTYVIEVMGRHAGDIALW 179
G PGTIDNDI GTD TIGF TAL TV AID RDT SH R V EVMGR GD L
1pfka.pdb 181 AAIAGGCEFVVVPEVEFSREDLVNEIKAGIAKGKKHAIVAITEHMCDVDELAHFIEKETG 240
4pfk.pdb 180 SGLAGGAETILIPEADYDMNDVIARLKRGHERGKKHSIIIVAEGVGSGVDFGRQIQEATG 239
AGG E PE D K G GKKH I E I TG
1pfka.pdb 241 RETRATVLGHIQRGGSPVPYDRILASRMGAYAIDLLLAGYGGRCVGIQNEQLVHHDIIDA 300
4pfk.pdb 240 FETRVTVLGHVQRGGSPTAFDRVLASRLGARAVELLLEGKGGRCVGIQNNQLVDHDIAEA 299
ETR TVLGH QRGGSP DR LASR GA A LLL G GGRCVGIQN QLV HDI A
1pfka.pdb 301 IENMKRPFKGDWLDCAKKLY 320
4pfk.pdb 300 LANKHTIDQRMYALSKELSI 319
N
#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue = Acidic,{D,E}
# Magenta = Basic,{K,R} and
# Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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