################################################################################################
# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Sat Jul 23 08:18:00 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/mycin.html
################################################################################################
#====================================
# Aligned_structures: 4
#   1: 1acx.pdb
#   2: 1akp.pdb
#   3: 1noa.pdb
#   4: 2mcm.pdb
#
# Length:        117
# Identity:       19/117 ( 16.2%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     47/117 ( 40.2%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           10/117 (  8.5%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1acx.pdb                1  -APAFSVSPASGASDGQSVSVSVAAA--G-ETYYIAQCAPVGG-QDACNPATATSFTTDA   55
1akp.pdb                1  ASAAVSVSPATGLADGATVTVSASGFATS-TSATALQCAILADGRGACNVAEFHDFSLSG   59
1noa.pdb                1  AAPTATVTPSSGLSDGTVVKVAGAGLQ-AGTAYDVGQCAWVNTGVLACDPANFSSVTADA   59
2mcm.pdb                1  -APGVTVTPATGLSNGQTVTVSATGLT-PGTVYHVGQCAVVEPGVIGCDATTSTDVTADA   58
                            ap   V Pa GlsdG  V Vs  g     t y   QCA v     aC  a     t da

1acx.pdb               56  SGAASFSFTVRKSYAGQTP-SGTPVGSVDCATD--ACNLGAGNSGLNLG-HVALTFG  108
1akp.pdb               60  GE-GTTSVVVRRSFTGYVMPDGPEVGAVDCDTAPGGCEIVVGGNTGEYG-NAAISFG  114
1noa.pdb               60  NGSASTSLTVRRSFEGFLF-DGTRWGTVNCTTA--ACQVGLSDAAGNGPEGVAISFN  113
2mcm.pdb               59  AGKITAQLKVHSSFQAVVGADGTPWGTVNCKVV--SCSAGLGSDSGEGA-AQAITFA  112
                            g    s  Vr Sf g    dGt  G V C t    C  g g   g      Ai F 


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
################################################EOF#################################################