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# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Fri Jul 22 21:22:12 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/mmo.html
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#====================================
# Aligned_structures: 2
#   1: 1mhyg.pdb
#   2: 1mtyg.pdb
#
# Length:        167
# Identity:       82/167 ( 49.1%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     82/167 ( 49.1%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:            5/167 (  3.0%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1mhyg.pdb               1  AKREPIHDNSIRTEWEAKIAKLTSVDQATKFIQDFRLAYTSPFRKSYDIDVDYQYIERKI   60
1mtyg.pdb               1  ---LGIHSNDTRDAWVNKIAHVNTLEKAAEMLKQFRMDHTTPFRNSYELDNDYLWIEAKL   57
                                IH N  R  W  KIA       A      FR   T PFR SY  D DY  IE K 

1mhyg.pdb              61  EEKLSVLKTEKLPVADLITKATTGEDAAAVEATWIAKIKAAKSKYEAEAIHIEFRQLYKP  120
1mtyg.pdb              58  EEKVAVLKARAFNEVDFRHKTAFGEDAKSVLDGTVAKMNAAKDKWEAEKIHIGFRQAYKP  117
                           EEK  VLK       D   K   GEDA  V     AK  AAK K EAE IHI FRQ YKP

1mhyg.pdb             121  PVLPVNVFLRTDAALGTVLMEIRNTDYYGTPLEGLRKERGVKVLHLQ  167
1mtyg.pdb             118  PIMPVNYFLDGERQLGTRLMELRNLNYYDTPLEELRKQRGVRVVH--  162
                           P  PVN FL     LGT LME RN  YY TPLE LRK RGV V H  


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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