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# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Sat Jul 23 14:42:38 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/ins.html
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#====================================
# Aligned_structures: 6
#   1: 1bom.pdb
#   2: 1igl.pdb
#   3: 2gf1.pdb
#   4: 2ins.pdb
#   5: 4ins.pdb
#   6: 6rlx.pdb
#
# Length:         94
# Identity:        8/ 94 (  8.5%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     17/ 94 ( 18.1%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           53/ 94 ( 56.4%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1bom.pdb                1  -QPQ----AVHTYCGRHLARTLADLCWEA-----------------------GVD---GI   29
1igl.pdb                1  A-----YRPSETLCGGELVDTLQFVCGDRGFYFSR---PASRVSR----RSR------GI   42
2gf1.pdb                1  --------GPETLCGAELVDALQFVCGDRGFYFN-K--PTGYGSSSRRAPQT------GI   43
2ins.pdb                1  --------VNQHLCGSHLVEALYLVCGERGFFYT-PKA--------------------GI   31
4ins.pdb                1  -------FVNQHLCGSHLVEALYLVCGERGFFYT-PKA--------------------GI   32
6rlx.pdb                1  ----SWMEEVIKLCGRELVRAQIAICGMS-----------------------T-WLYSAL   32
                                       lCG  Lv  l   Cg                               gi

1bom.pdb               30  VDECCLRPCSVDVLLSY-C---------------   47
1igl.pdb               43  VEECCFRSCDLALLETY-CATPAKSE--------   67
2gf1.pdb               44  VDECCFRSCDLRRLEMYCA-------PLKPAKSA   70
2ins.pdb               32  VEQCCASVCSLYQLENY-CN--------------   50
4ins.pdb               33  VEQCCTSICSLYQLENY-CN--------------   51
6rlx.pdb               33  ANKCCHVGCTKRSLARF-C---------------   50
                           v  CC   C    L  y c               


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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