################################################################################################
# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Sat Jul 23 19:53:10 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/hom.html
################################################################################################
#====================================
# Aligned_structures: 8
#   1: 1akha.pdb
#   2: 1b8ib.pdb
#   3: 1ftt.pdb
#   4: 1ftz.pdb
#   5: 1hom.pdb
#   6: 1lfb.pdb
#   7: 1nk3p.pdb
#   8: 2hdda.pdb
#
# Length:        121
# Identity:        1/121 (  0.8%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:      6/121 (  5.0%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           73/121 ( 60.3%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1akha.pdb               1  --------------------ISPQARAFLEEVFRRK---QSLNSKEKEEVAKKCG-----   32
1b8ib.pdb               1  ----------R-------RNFSKQASEILNEYFYSHLSNPYPSEEAKEELARKCG-----   38
1ftt.pdb                1  --MR--RKR-R-------VLFSQAQVYELERRFKQQ---KYLSAPEREHLASMIH-----   40
1ftz.pdb                1  -----------MDSKRTRQTYTRYQTLELEKEFHFN---RYITRRRRIDIANALS-----   41
1hom.pdb                1  MRKR-----GR-------QTYTRYQTLELEKEFHFN---RYLTRRRRIEIAHALC-----   40
1lfb.pdb                1  ----------R-------FKWGPASQQILFQAYERQ---KNPSKEERETLVEECNRAECI   40
1nk3p.pdb               1  ----KKRKR-R-------VLFTKAQTYELERRFRQQ---RYLSAPEREHLASLIR-----   40
2hdda.pdb               1  ----------R-------TAFSSEQLARLKREFNEN---RYLTERRRQQLSSELG-----   35
                                                       L   f                           

1akha.pdb              33  ----------------I-TPLQVRVWFINKR-MRS-------------------------   49
1b8ib.pdb              39  ----------------I-TVSQVSNWFGNKR-IRY-KK-N--------------------   58
1ftt.pdb               41  ----------------L-TPTQVKIWFQNHR-YKM-KRQAKDKAAQQ-------------   68
1ftz.pdb               42  ----------------LSERQIKIWFQNRRMKSK-KDRTL---------------DSSPE   69
1hom.pdb               41  ----------------L-TERQIKIWFQNRR-MKW-KKEN--------KTKGEPG-----   68
1lfb.pdb               41  QRGVSPSQAQGLGSNLV-TEVRVYNWFANRR-KEE-AFRH--------------------   77
1nk3p.pdb              41  ----------------L-TPTQVKIWFQNHR-YKT-KRAQN------E------------   63
2hdda.pdb              36  ----------------L-NEAQIKIWFKNKR-AKI-KK-S--------------------   55
                                                    wf n r                             

1akha.pdb                  -     
1b8ib.pdb                  -     
1ftt.pdb                   -     
1ftz.pdb               70  H   70
1hom.pdb                   -     
1lfb.pdb                   -     
1nk3p.pdb                  -     
2hdda.pdb                  -     
                            


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
################################################EOF#################################################