################################################################################################
# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Sat Jul 23 07:32:02 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/histone.html
################################################################################################
#====================================
# Aligned_structures: 4
#   1: 1aoia.pdb
#   2: 1aoib.pdb
#   3: 1aoic.pdb
#   4: 1aoid.pdb
#
# Length:        109
# Identity:        2/109 (  1.8%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     14/109 ( 12.8%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           46/109 ( 42.2%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1aoia.pdb               1  -----------ELLIRKL-------PFQRLVREIAQDFKTD-LRFQSSAVMALQEASEAY   41
1aoib.pdb               1  -KVLRDNI----QGITKP-------AIRRLARRGG----V--KRISGLIYEETRGVLKVF   42
1aoic.pdb               1  RAKAKTRSSRAGLQFPVG-------RVHRLLRKGN----Y-AERVGAGAPVYLAAVLEYL   48
1aoid.pdb               1  ------------------RRKTRKESYAIYVYKVLKQVHPD-TGISSKAMSIMNSFVNDV   41
                                                       rl r           r    a           

1aoia.pdb              42  LVALFEDTNLCAIHAKRVTIMPKDIQLARRIRGE--------RA-----   77
1aoib.pdb              43  LENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGR--------TLYGFGG   83
1aoic.pdb              49  TAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGRVTIAQGG-   96
1aoid.pdb              42  FERIAGEASRLAHYNKRSTITSREIQTAVRLLLP---------------   75
                                  a   a   Kr ti     q A r                   


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
################################################EOF#################################################