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# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Sat Jul 23 01:59:31 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/dutpase.html
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#====================================
# Aligned_structures: 3
#   1: 1dun.pdb
#   2: 1dupa.pdb
#   3: 1duta.pdb
#
# Length:        142
# Identity:       17/142 ( 12.0%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     69/142 ( 48.6%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           29/142 ( 20.4%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1dun.pdb                1  ---M--LAYQGT-----QI----KEKRDEDAGFDLCVPY--DIMIPVSDTKIIPTDVKIQ   44
1dupa.pdb               1  MMKKIDVKILDPRVGKEFPLPTY--ATSGSAGLDLRACLNDAVELAPGDTTLVPTGLAIH   58
1duta.pdb               1  ------MIIEGD-----GI----LDKRSEDAGYDLLAAK--EIHLLPGEVKVIPTGVKLM   43
                                   i g       i      krsedAG DL a     i l pgdtk iPTgvki 

1dun.pdb               45  V-PPNSFGWVTGKSSMAKQ-GLLI--NGGIIDEGYTGEIQVICTNIGKSNIKLIEGQKFA  100
1dupa.pdb              59  IADPSLAAMMLPRSGLGHKHGIVLGNLVGLIDSDYQGQLMISVWNRGQDSFTIQPGERIA  118
1duta.pdb              44  L-PKGYWGLIIGKSSIGSK-GLDV--LGGVIDEGYRGEIGVIMINVSRKSITLMERQKIA   99
                             pp   g   gkSs g k Gl    lgG IDegY Gei vi  N g  sitl egqkiA

1dun.pdb              101  QLIILQHHSNSRQPWDENKI--  120
1dupa.pdb             119  QMIFVPVVQAEFNLVE----DF  136
1duta.pdb             100  QLIILPCKHEVLEQGK----VV  117
                           QlIilp                


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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