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# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Sat Jul 23 01:19:42 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/cbm12.html
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#====================================
# Aligned_structures: 3
#   1: 1aiw.pdb
#   2: 1e15a.pdb
#   3: 1ed7a.pdb
#
# Length:         74
# Identity:        6/ 74 (  8.1%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     19/ 74 ( 25.7%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           37/ 74 ( 50.0%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1aiw.pdb                1  MGDCA-----NANVYPNWVSKDWAGGQPTHNEAGQSIVYKGNLYTANWYTAS--V---PG   50
1e15a.pdb               1  -----PIMTAPAYVPG------------TTYAQGALVSYQGYVWQTKWGYITS-A---PG   39
1ed7a.pdb               1  -----------AWQVN------------TAYTAGQLVTYNGKTYKCLQPHTSLAGWEP-S   36
                                      A v              T y aGqlv Y G  y   w   s       g

1aiw.pdb               51  -SDSSWT-QVGSCN   62
1e15a.pdb              40  -SDSAWL-KVGRV-   50
1ed7a.pdb              37  NVPALWQL------   44
                            sds W        


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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