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# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Wed Jul 27 12:30:59 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/bowman.html
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#====================================
# Aligned_structures: 5
#   1: 1bbi.pdb
#   2: 1pbia.pdb
#   3: 1pi2.pdb
#   4: 1sbwi.pdb
#   5: 1tabi.pdb
#
# Length:         77
# Identity:        8/ 77 ( 10.4%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:      9/ 77 ( 11.7%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           63/ 77 ( 81.8%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1bbi.pdb                1  DD-ESSKPCCDQCACTKSNPPQCRCSDMRLNSCHSACKSCICALSYPAQCFCVDIT-DFC   58
1pbia.pdb               1  -----KSACCDTCLCTKSNPPTCRC-VDVGETCHSACLSCICAYSNPPKCQCFDTQ-KFC   53
1pi2.pdb                1  ----YSKPCCDLCMCTRSMPPQCSC-EDRINSCHSDCKSCMCTRSQPGQCRCLDTN-DFC   54
1sbwi.pdb               1  -----------SCRCTKSIPPQCHC-----------------------------------   14
1tabi.pdb               1  --SESSKPCCDQCSCTKSMPPKCRCS---------------------------DIRNDFC   31
                                       C CTkS PP C C                                   

1bbi.pdb               59  YEPCKPSEDDKEN----   71
1pbia.pdb              54  YKQCH--NSELEEVIKN   68
1pi2.pdb               55  YKPCK--AA--------   61
1sbwi.pdb                  -----------------     
1tabi.pdb              32  YEPCK------------   36
                                            


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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