################################################################################################
# Program: MUSTANG-Lite v0.1: A Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Sun Jul 24 06:18:08 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/az.html
################################################################################################
#====================================
# Aligned_structures: 22
# 1: 1adwa.pdb
# 2: 1arn.pdb
# 3: 1azu.pdb
# 4: 1bawa.pdb
# 5: 1iuz.pdb
# 6: 1joi.pdb
# 7: 1kdj.pdb
# 8: 1mdae.pdb
# 9: 1nin.pdb
# 10: 1nwpa.pdb
# 11: 1paz.pdb
# 12: 1pcs.pdb
# 13: 1pla.pdb
# 14: 1plc.pdb
# 15: 1pmy.pdb
# 16: 1rkra.pdb
# 17: 1zia.pdb
# 18: 2azaa.pdb
# 19: 2pcfa.pdb
# 20: 2plt.pdb
# 21: 7pcy.pdb
# 22: 9pcy.pdb
#
# Length: 201
# Identity: 5/201 ( 2.5%) (Calculated as the percentage of conserved columns in the alignment.)
# Similarity: 5/201 ( 2.5%) (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps: 132/201 ( 65.7%) (Calculated as the percentage of columns with atleast one gap.)
#===========================================ALIGNMENT START=========================================
1adwa.pdb 1 ------------------ATHEVHMLNKGESGAMVFEPAFVRAEP---GDVINFVPTD-- 37
1arn.pdb 1 AQ----------------CEATVESN-----DAMQYNVKEIVVDKSCKQFTMHLKHVG-K 38
1azu.pdb 1 ------------------CSVDIQGN-----DQMQFNTNAITVDKSCKQFTVNLSHPG-N 36
1bawa.pdb 1 ------------------ETFTVKMG-A-DSGLLQFEPANVTVHP---GDTVKWVNNKL- 36
1iuz.pdb 1 -------------------AQIVKLG-G-DDGSLAFVPSKISVAA---GEAIEFVNNAG- 35
1joi.pdb 1 AE----------------CKVTVDST-----DQMSFNTKAIEIDKSCKTFTVELTHSG-S 38
1kdj.pdb 1 --------------------AKVEVG-D-EVGNFKFYPDSITVSA---GEAVEFTLVGE- 34
1mdae.pdb 1 --ATIPSESPFAAAEVADGAIVVDIA-K-----MKYETPELHVKV---GDTVTWINREA- 48
1nin.pdb 1 ------------------ETYTVKLG-S-DKGLLVFEPAKLTIKP---GDTVEFLNNKV- 36
1nwpa.pdb 1 AE----------------CKVTVDST-----DQMSFNTKDIAIDKSCKTFTVELTHSG-S 38
1paz.pdb 1 ------------------ENIEVHMLNKGAEGAMVFEPAYIKANP---GDTVTFIPVD-- 37
1pcs.pdb 1 ------------------ANATVKMG-S-DSGALVFEPSTVTIKA---GEEVKWVNNKL- 36
1pla.pdb 1 --------------------AEVKLG-S-DDGGLVFSPSSFTVAA---GEKITFKNNAG- 34
1plc.pdb 1 --------------------IDVLLG-A-DDGSLAFVPSEFSISP---GEKIVFKNNAG- 34
1pmy.pdb 1 ------------------DEVAVKMLNSGPGGMMVFDPALVRLKP---GDSIKFLPTD-- 37
1rkra.pdb 1 AE----------------CSVDIAGN-----DGMQFDKKEITVSKSCKQFTVNLKHPG-K 38
1zia.pdb 1 ------------------ADFEVHMLNKGKDGAMVFEPASLKVAP---GDTVTFIPTD-- 37
2azaa.pdb 1 AQ----------------CEATIESN-----DAMQYDLKEMVVDKSCKQFTVHLKHVG-K 38
2pcfa.pdb 1 --------------------VEVLLG-G-GDGSLAFLPGDFSVAS---GEEIVFKNNAG- 34
2plt.pdb 1 -------------------DATVKLG-A-DSGALEFVPKTLTIKS---GETVNFVNNAG- 35
7pcy.pdb 1 -------------------AAIVKLG-G-DDGSLAFVPNNITVGA---GESIEFINNAG- 35
9pcy.pdb 1 --------------------LEVLLG-S-GDGSLVFVPSEFSVPS---GEKIVFKNNAG- 34
1adwa.pdb 38 -----KSHNVEAIKE------------------------ILPEGVES------------F 56
1arn.pdb 39 MAKVAMGHNLVLTKD-ADKQAVATDGMGAGLAQDYVKAG---------DTR---VIAHT- 84
1azu.pdb 37 LPKNVMGHNWVLSTA-ADMQGVVTDGMASGLDKDYLKPD---------DSR---VIAHT- 82
1bawa.pdb 37 -----PPHNILFDDK------------------------QVPG----ASKELADK----L 59
1iuz.pdb 36 -----FPHNIVFDED------------------------AVPAGVDA------DA----I 56
1joi.pdb 39 LPKNVMGHNWVLSSA-ADMPGIASDGMAAGIDKNYLKEG---------DTR---VIAHT- 84
1kdj.pdb 35 -----TGHNIVFDIPAGAPGTVASELKAA-----SMDEN--------------------- 63
1mdae.pdb 49 -----MPHNVHFVAG------------------------VLGEAALK------------G 67
1nin.pdb 37 -----PPHNVVFDAA------------------------LNPA----KSADLAKS----L 59
1nwpa.pdb 39 LPKNVMGHNLVISKE-ADMQPIATDGLSAGIDKQYLKDG---------DAR---VIAHT- 84
1paz.pdb 38 -----KGHNVESIKD------------------------MIPEGAEK------------F 56
1pcs.pdb 37 -----SPHNIVFDAD-------------------------G------VPADTAAK----L 56
1pla.pdb 35 -----FPHNIVFDED------------------------EVPAGVNA------EK----I 55
1plc.pdb 35 -----FPHNIVFDED------------------------SIPSGVDA------SK----I 55
1pmy.pdb 38 -----KGHNVETIKG------------------------MAPDGADY------------V 56
1rkra.pdb 39 LAKNVMGHNWVLTKQ-ADMQGAVNDGMAAGLDNNYVKKD---------DAR---VIAHT- 84
1zia.pdb 38 -----KGHNVETIKG------------------------MIPDGAEA------------F 56
2azaa.pdb 39 MAKSAMGHNWVLTKE-ADKEGVATDGMNAGLAQDYVKAG---------DTR---VIAHT- 84
2pcfa.pdb 35 -----FPHNVVFDED------------------------EIPSGVDA------AK----I 55
2plt.pdb 36 -----FPHNIVFDED------------------------AIPSGVNA------DA----I 56
7pcy.pdb 36 -----FPHNIVFDED------------------------AVPAGVDA------DA----I 56
9pcy.pdb 35 -----FPHNVVFDED------------------------EIPAGVDA------VK----I 55
HN
1adwa.pdb 57 KSK--I------NESYTLTVT---EP-GLYGVKCTP-HFGMGMVGLVQVGDAPENLDAAK 103
1arn.pdb 85 -----KVIGGGESDSVTFDVS-KIAAGENYAYFCSFPGHWAMMKGTLKLGS--------- 129
1azu.pdb 83 -----KLIGSGEKDSVTFDVS-KLKEGEQYMFFCTFPGHSALMKGTLTLK---------- 126
1bawa.pdb 60 SHS--QLMFS-PGESYEITFSSDFPA-GTYTYYCAP-HRGAGMVGKITVEG--------- 105
1iuz.pdb 57 SYD--DYLNS-KGETVVRKLS---TP-GVYGVYCEP-HAGAGMKMTITVQ---------- 98
1joi.pdb 85 -----KIIGAGEKDSVTFDVS-KLAAGTDYAFFCSFPGHISMMKGTVTVK---------- 128
1kdj.pdb 64 -----DLLSEDE-PSFKAKVS---TP-GTYTFYCTP-HKSANMKGTLTVK---------- 102
1mdae.pdb 68 PMM--K-----KEQAYSLTFT---EA-GTYDYHCTP-HP--FMRGKVVVE---------- 103
1nin.pdb 60 SHK--QLLMS-PGQSTSTTFPADAPA-GEYTFYCEP-HRGAGMVGKITVAG--------- 105
1nwpa.pdb 85 -----KVIGAGEKDSVTFDVS-KLAAGEKYGFFCSFPGHISMMKGTVTLK---------- 128
1paz.pdb 57 KSK--I------NENYVLTVT---QP-GAYLVKCTP-HYAMGMIALIAVGDSPANLDQIV 103
1pcs.pdb 57 SHK--GLLFA-AGESFTSTFT---EP-GTYTYYCEP-HRGAGMVGKVVVE---------- 98
1pla.pdb 56 SQP--EYLNG-AGETYEVTLT---EK-GTYKFYCEP-HAGAGMKGEVTVN---------- 97
1plc.pdb 56 SMSEEDLLNA-KGETFEVALS---NK-GEYSFYCSP-HQGAGMVGKVTVN---------- 99
1pmy.pdb 57 KTT--V------GQEAVVKFD---KE-GVYGFKCAP-HYMMGMVALVVVGDKRDNLEAAK 103
1rkra.pdb 85 -----KVIGGGETDSVTFDVS-KLAAGEDYAYFCSFPGHFALMKGVLKLVD--------- 129
1zia.pdb 57 KSK--I------NENYKVTFT---AP-GVYGVKCTP-HYGMGMVGVVQVGDAPANLEAVK 103
2azaa.pdb 85 -----KVIGGGESDSVTFDVS-KLTPGEAYAYFCSFPGHWAMMKGTLKLSN--------- 129
2pcfa.pdb 56 SMSEEDLLNA-PGETYKVTLT---EK-GTYKFYCSP-HQGAGMVGKVTVN---------- 99
2plt.pdb 57 SRD--DYLNA-PGETYSVKLT---AA-GEYGYYCEP-HQGAGMVGKIIVQ---------- 98
7pcy.pdb 57 SAE--DYLNS-KGQTVVRKLT---TP-GTYGVYCDP-HSGAGMKMTITVQ---------- 98
9pcy.pdb 56 SMPEEELLNA-PGETYVVTLD---TK-GTYSFYCSP-HQGAGMVGKVTVN---------- 99
Y C M
1adwa.pdb 104 TAKMPKKARERMDAELAQVN- 123
1arn.pdb ---------------------
1azu.pdb ---------------------
1bawa.pdb ---------------------
1iuz.pdb ---------------------
1joi.pdb ---------------------
1kdj.pdb ---------------------
1mdae.pdb ---------------------
1nin.pdb ---------------------
1nwpa.pdb ---------------------
1paz.pdb 104 SAKKPKIVQERLEKVIA---- 120
1pcs.pdb ---------------------
1pla.pdb ---------------------
1plc.pdb ---------------------
1pmy.pdb 104 SVQHNKLTQKRLDPLFAQIQ- 123
1rkra.pdb ---------------------
1zia.pdb 104 GAKNPKKAQERLDAALAALGN 124
2azaa.pdb ---------------------
2pcfa.pdb ---------------------
2plt.pdb ---------------------
7pcy.pdb ---------------------
9pcy.pdb ---------------------
#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue = Acidic,{D,E}
# Magenta = Basic,{K,R} and
# Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
################################################EOF#################################################