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# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Fri Jul 22 18:15:54 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/aakinase.html
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#====================================
# Aligned_structures: 2
#   1: 1b7ba.pdb
#   2: 1e19a.pdb
#
# Length:        320
# Identity:      142/320 ( 44.4%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:    142/320 ( 44.4%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           20/320 (  6.2%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1b7ba.pdb               1  GKKMVVALGGNAIL-S-NDASAHAQQQALVQTSAYLVHLIKQGHRLIVSHGNGPQVGNLL   58
1e19a.pdb               1  GKRVVIALGGNALQQRGQKGSYEEMMDNVRKTARQIAEIIARGYEVVITHGNGPQVGSLL   60
                           GK  V ALGGNA        S          T       I  G      HGNGPQVG LL

1b7ba.pdb              59  LQQQAADSE---KNPAMPLDTCVAMTQGSIGYWLSNALNQELNKAGIKKQVATVLTQVVV  115
1e19a.pdb              61  LHMDAGQ--ATYGIPAQPMDVAGAMSQGWIGYMIQQALKNELRKRGMEKKVVTIITQTIV  118
                           L   A         PA P D   AM QG IGY    AL  EL K G  K V T  TQ  V

1b7ba.pdb             116  DPADEAFKNPTKPIGPFLTEAEAKEAMQ-AGAIFKEDAGRG-WRKVVPSPKPIDIHEAET  173
1e19a.pdb             119  DKNDPAFQNPTKPVGPFYDEETAKRLAREKGWIVKEDSGRGWR-RVVPSPDPKGHVEAET  177
                           D  D AF NPTKP GPF  E  AK      G I KED GRG    VVPSP P    EAET

1b7ba.pdb             174  INTLIKNDIITISCGGGGIPVVG--QELKGVEAVIDKDFASEKLAELVDADALVILTGVD  231
1e19a.pdb             178  IKKLVERGVIVIASGGGGVPVILEDGEIKGVEAVIDKDLAGEKLAEEVNADIFMILTDVN  237
                           I  L     I I  GGGG PV     E KGVEAVIDKD A EKLAE V AD   ILT V 

1b7ba.pdb             232  YVCINYGKPDEKQLTNVTVAELEEYKQAGHFAPGSMLPKIEAAIQFVESQPNK-QAIITS  290
1e19a.pdb             238  GAALYYGTEKEQWLREVKVEELRKYYEEGHFKAGSMGPKVLAAIRFIEWG--GERAIIAH  295
                                YG   E  L  V V EL  Y   GHF  GSM PK  AAI F E       AII  

1b7ba.pdb             291  LENL---GSMSGDEIVGTVV  307
1e19a.pdb             296  LEKAVEALEG-KTGTQVLP-  313
                           LE                  


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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