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# Program: MUSTANG-Lite v0.1: A Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Sat Jul 23 09:34:42 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/WW.html
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#====================================
# Aligned_structures: 4
# 1: 1e0la.pdb
# 2: 1eg4a.pdb
# 3: 1i5hw.pdb
# 4: 1pina.pdb
#
# Length: 80
# Identity: 0/ 80 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.)
# Similarity: 1/ 80 ( 1.2%) (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps: 71/ 80 ( 88.8%) (Calculated as the percentage of columns with atleast one gap.)
#===========================================ALIGNMENT START=========================================
1e0la.pdb 1 G-ATA-------VSE--------------WTEYKTA------D-G-KTYYYN----NRT- 25
1eg4a.pdb 1 -----PASQHFLST-S-------VQG--PWERAISP------NKV-PYYINH----E-T- 32
1i5hw.pdb 1 -GSPV-----------DSNDLGPLPPG-W-------EERTHTD--GRV----FFINHN-I 33
1pina.pdb 1 ----------------------KLPPGWE-------KRMSRSS--GRV----YYFNHI-T 24
1e0la.pdb 26 LESTW-EKPQELK------- 37
1eg4a.pdb 33 QTTCW-D------------- 38
1i5hw.pdb 34 KKTQ-WEDPRM-QNVAITG- 50
1pina.pdb 25 NASQ-WERPS---------G 34
e
#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue = Acidic,{D,E}
# Magenta = Basic,{K,R} and
# Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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