################################################################################################
# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Sat Jul 23 00:12:26 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/WHEP-TRS.html
################################################################################################
#====================================
# Aligned_structures: 2
#   1: 1fyja.pdb
#   2: 1r1ba.pdb
#
# Length:         67
# Identity:        7/ 67 ( 10.4%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:      7/ 67 ( 10.4%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           21/ 67 ( 31.3%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1fyja.pdb               1  D--SLVLYNRVAVQGDVVRELKAKKA----PKEDVDAAVKQLLSLKAEYKEKTGQ--EYK   52
1r1ba.pdb               1  -MVYDKIAAQGEVVRKLKAEK-----APKAKVTEAVECLLSLKAEYK---EKTG-KEYVP   50
                                       V      E                     L        EKTG      

1fyja.pdb              53  PGNPP--   57
1r1ba.pdb              51  GLEH-HH   56
                                  


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
################################################EOF#################################################