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# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Sat Jul 23 00:01:40 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/UBX.html
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#====================================
# Aligned_structures: 2
#   1: 1h8ca.pdb
#   2: 1i42a.pdb
#
# Length:         98
# Identity:       14/ 98 ( 14.3%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     14/ 98 ( 14.3%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           25/ 98 ( 25.5%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1h8ca.pdb               1  ----------NAEPVSKLRIRTPSGEFLERRFLASNKLQIVFDFVASKGFP----WDEYK   46
1i42a.pdb               1  KASSSILINEAEP-TTNIQIRLADGGRLVQKFNHSHRISDIRLFIVDAR--PAMAATSFV   57
                                              IR   G  L   F  S        F                

1h8ca.pdb              47  LLSTFPRRDVTQLDPNKSLLEV--KLFPQETLFLEAKE   82
1i42a.pdb              58  LMTTFPNKEL-ADEN-QTLKEANLL-NAVIVQRL-T--   89
                           L  TFP            L E            L    


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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