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# Program: MUSTANG-Lite v0.1: A Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Fri Jul 22 23:46:42 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/Transglut_core.html
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#====================================
# Aligned_structures: 2
# 1: 1evua.pdb
# 2: 1g0da.pdb
#
# Length: 333
# Identity: 143/333 ( 42.9%) (Calculated as the percentage of conserved columns in the alignment.)
# Similarity: 143/333 ( 42.9%) (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps: 27/333 ( 8.1%) (Calculated as the percentage of columns with atleast one gap.)
#===========================================ALIGNMENT START=========================================
1evua.pdb 1 DAVYLDNEKEREEYVLNDIGVIFYGEVNDIKTRSWSYGQFEDGILDTCLYVMDRAQM--- 57
1g0da.pdb 1 DMVYLPDESKLQEYVMNEDGVIYMGTWDYIRSIPWNYGQFEDYVMDICFEVLDNS--PAA 58
D VYL E EYV N GVI G I W YGQFED D C V D
1evua.pdb 58 ------DLSGRGNPIKVSRVGSAMVNAKDDEGVLVGSWDNIYAYGVPPSAWTGSVDILLE 111
1g0da.pdb 59 LKNSEMDIEHRSDPVYVGRTITAMVNSNGDRGVLTGRWEEPYTDGVAPYRWTGSVPILQQ 118
D R P V R AMVN D GVL G W Y GV P WTGSV IL
1evua.pdb 112 YRSS-ENPVRYGQCWVFAGVFNTFLRCLGIPARIVTNYFSAHDNDANLQMDIFLEEDGNV 170
1g0da.pdb 119 WSKAGVRPVKYGQCWVFAAVACTVLRCLGIPTRPITNFASAHDVDGNLSVDFLLNERLES 178
PV YGQCWVFA V T LRCLGIP R TN SAHD D NL D L E
1evua.pdb 171 NSKLTKD-SVWNYHCWNEAWMTRPDLPVGFGGWQAVDSTPQENSDG-MYRCGPASVQAIK 228
1g0da.pdb 179 LDSRQRSDSSWNFHCWVESWMSREDLPEGNDGWQVLDPTPQ-ELSDGEFCCGPCPVAAIK 237
S WN HCW E WM R DLP G GWQ D TPQ CGP V AIK
1evua.pdb 229 HGHVCFQFDAPFVFAEVNSDLIYITAKKDGTHVVENVDAT-HIGKLIVTKQIGGDGMMDI 287
1g0da.pdb 238 EGNLGVKYDAPFVFAEVNADTIYWIVQKDGQRRKI-TEDHASVGKNISTKSVYGNHREDV 296
G DAPFVFAEVN D IY KDG GK I TK G D
1evua.pdb 288 TDTYKFQEGQEEERLALETALMYGAK-KPLNT- 318
1g0da.pdb 297 TLHYKYPEGSQKEREVYKKAGR----RV----T 321
T YK EG ER A
#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue = Acidic,{D,E}
# Magenta = Basic,{K,R} and
# Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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