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# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Mon Jul 25 15:43:34 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/TPK.html
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#====================================
# Aligned_structures: 2
#   1: 1ig0a.pdb
#   2: 1ig3a.pdb
#
# Length:        328
# Identity:       71/328 ( 21.6%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     71/328 ( 21.6%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           85/328 ( 25.9%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1ig0a.pdb               1  EE--CIENPERIKIGTD-LINIRNKMNLKELIHPNED-E-NSTLLILNQKIDIPRPLFYK   55
1ig3a.pdb               1  --HSSGLV--------PRGSHMEHAFTPLEPLL--PTGNLKYCLVVLNQPL-DA--RFRH   45
                                                        E             L  LNQ        F  

1ig0a.pdb              56  IWKLHDLKVCADGAANRLYDYLDDDETLRIKYLPNYIIGDLDSLSEKVYKYYRKNKVTII  115
1ig3a.pdb              46  LWKKALLRACADGGANHLYDLTE-G--ERESFLPEFVSGDFDSIRPEVKEYYTKKGCDLI  102
                            WK   L  CADG AN LYD        R   LP    GD DS    V  YY K     I

1ig0a.pdb             116  KQTTQYSTDFTKCVNLISLHFNSPEFRSLISNKDNLQSNHGIELEKGIHTLYNTMTESLV  175
1ig3a.pdb             103  STPDQDHTDFTKCLQVLQRKIEEK------------------------------------  126
                               Q  TDFTKC                                               

1ig0a.pdb             176  FSKVTP----ISLLALGGIGGRFDQTVHSITQLYTLSENASYFKLCYMTPTDLIFLIKKN  231
1ig3a.pdb             127  ------ELQVDVIVTLGGLGGRFDQIMASVNTLFQATHIT-PVPIIIIQKDSLIYLLQPG  179
                                          LGG GGRFDQ   S   L                   LI L    

1ig0a.pdb             232  GTLIEYDPQFRN-TC-IGNCGLLPIGEATLVKETRGLKWDVKNWPTSVVTGRVSSSNRFV  289
1ig3a.pdb             180  KHRLHVD-----TGMEGSWCGLIPVGQPCNQVTTTGLKWNLTNDVLGFGT-LVSTSNTYD  233
                                 D            CGL P G       T GLKW   N      T  VS SN   

1ig0a.pdb             290  GDNCCFIDTKDDIILNVEIFVDKLIDFL  317
1ig3a.pdb             234  GSGLVTVETDHPLLWTMAIKS-------  254
                           G       T         I         


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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