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# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Fri Jul 22 23:31:05 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/TIMP.html
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#====================================
# Aligned_structures: 2
#   1: 1br9.pdb
#   2: 1ueab.pdb
#
# Length:        192
# Identity:       74/192 ( 38.5%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     74/192 ( 38.5%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           21/192 ( 10.9%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1br9.pdb                1  CSCSPVHPQQAFCNADVVIRAKAVSEKEVDSGNDIYGNPI-KRIQYEIKQIKMFKGPEK-   58
1ueab.pdb               1  CTCVPPHPQTAFCNSDLVIRAKFVGTPEVAQ-T-------TLYQRYEIKMTKMYKGF-QA   51
                           C C P HPQ AFCN D VIRAK V   EV                YEIK  KM KG    

1br9.pdb               59  -----DIEFIYTAPSSAVCGVSLD--VGGKKEYLIAGKAEGDGKMHITLCDFIVPWDTLS  111
1ueab.pdb              52  LGDAADIRFVYTPAMESVCGYFHRSHA-RSEEFLIAGKLQD-GLLHITTCSFVAPWNSLS  109
                                DI F YT     VCG           E LIAGK    G  HIT C F  PW  LS

1br9.pdb              112  TTQKKSLNHRYQMGC-ECKITRCPMIPCYISSPDECLWMDWVTEKNINGHQAKFFACIKR  170
1ueab.pdb             110  LAQRRGFTKTYTVGCEECTVFPCLSIPCKLQSGTHCLWTDQLLQGSEKGFQSRHLACLPR  169
                             Q       Y  GC EC    C  IPC   S   CLW D        G Q    AC  R

1br9.pdb              171  SDGSCAWYRGAA  182
1ueab.pdb             170  EPGLCTWQSLRS  181
                             G C W     


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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