################################################################################################
# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Sat Jul 23 04:10:54 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/RING.html
################################################################################################
#====================================
# Aligned_structures: 3
#   1: 1bor.pdb
#   2: 1chc.pdb
#   3: 1rmd.pdb
#
# Length:         85
# Identity:        2/ 85 (  2.4%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     15/ 85 ( 17.6%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           47/ 85 ( 55.3%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1bor.pdb                1  -----EEEFQ------FLRCQQCQAEAKCPKLLPCLHTL--CSGCL-EA---------SG   37
1chc.pdb                1  MATVA------------ERCPICLEDPSNYSMALPCLHAFCYVCITR--WIR--QNPTCP   44
1rmd.pdb                1  ----------PAHFVKSISCQICEHILADPVETSCKHLF--CRICI-L-RCLKVMGSYCP   46
                                             rCqiC      p    c h    c  c             cp

1bor.pdb               38  MQCPICQAPWP---LGADTPAL---   56
1chc.pdb               45  LCKVPV-E-SVVHT--------IES   59
1rmd.pdb               47  SCRYPC-FPTD---LES-----PV-   61
                            c  pc                   


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
################################################EOF#################################################