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# Program: MUSTANG-Lite v0.1: A Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Fri Jul 22 22:07:48 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/Peptidase_C15.html
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#====================================
# Aligned_structures: 2
# 1: 1a2za.pdb
# 2: 1auga.pdb
#
# Length: 221
# Identity: 75/221 ( 33.9%) (Calculated as the percentage of conserved columns in the alignment.)
# Similarity: 75/221 ( 33.9%) (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps: 12/221 ( 5.4%) (Calculated as the percentage of columns with atleast one gap.)
#===========================================ALIGNMENT START=========================================
1a2za.pdb 1 -MKKVLITGFEPFGGDSKNPTEQIAKYFDRKQIGNAMVYGRVLPVSVKRATIELKRYLEE 59
1auga.pdb 1 MEKKVLLTGFDPFGGETVNPSWEAVKRLNGAAEGPASIVSEQVPTVFYKSLAVLREAIKK 60
KKVL TGF PFGG NP K G A P L
1a2za.pdb 60 IKPEIVINLGLAPTYSNITVERIAVNIIDARIPDNDGYQPIDEKIEEDAPLAYMATLPVR 119
1auga.pdb 61 HQPDIIICVGQAGGRMQITPERVAINLNEARIPDNEGNQPVGEDISQGGPAAYWTGLPIK 120
P I I G A IT ER A N ARIPDN G QP E I P AY LP
1a2za.pdb 120 AITKTLRDNGIPATISYSAGTYLCNYVMFKTLHFSKIEGYPLKAGFIHVPYTPDQVVNKF 179
1auga.pdb 121 RIVEEIKKEGIPAAVSYTAGTFVCNHLFYGLMDEISRHHPHIRGGFIHIPYIPEQTLQK- 179
I GIPA SY AGT CN GFIH PY P Q K
1a2za.pdb 180 FLLGKNTPSMCLEAEIKAIELAVKVSLDYLEKDRDDIKIPL 220
1auga.pdb 180 -----SAPSLSLDHITKALKIAAVTAAVHE----DDIETG- 210
PS L KA A DDI
#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue = Acidic,{D,E}
# Magenta = Basic,{K,R} and
# Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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