################################################################################################
# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Fri Jul 22 22:33:59 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/PPDK_N_term.html
################################################################################################
#====================================
# Aligned_structures: 2
#   1: 1h6za.pdb
#   2: 1kbla.pdb
#
# Length:        410
# Identity:      206/410 ( 50.2%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:    206/410 ( 50.2%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           47/410 ( 11.5%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1h6za.pdb               1  VAKKWVYYFGGGNADGNKNMKELLGGKGANLAEMVNLGIPVPPGFTITTEACKTYQET-E   59
1kbla.pdb               1  --AKWVYKF----EEGNASMRNLLGGKGCNLAEMTILGMPIPQGFTVTTEACTEYYNSGK   54
                              KWVY F      GN  M  LLGGKG NLAEM  LG P P GFT TTEAC  Y     

1h6za.pdb              60  TIPQEVADQVRENVSRVEKEMGAKFGDPANPLLFSVRSGAAAS--------DTVLNLGLN  111
1kbla.pdb              55  QITQEIQDQIFEAITWLEELNGKKFGDTEDPLLVSVRSGA---RASMPGMMDTILNLGLN  111
                            I QE  DQ  E     E   G KFGD   PLL SVRSGA           DT LNLGLN

1h6za.pdb             112  KVTVDAWVRRAPRLERFVYDSYRRFITMYADIVMQVGREDFEEALSRMKERRGTKFDTDL  171
1kbla.pdb             112  DVAVEGFAKKTG-NPRFAYDSYRRFIQMYSDVVMEVPKSHFEKIIDAMKEEKGVHFDTDL  170
                            V V           RF YDSYRRFI MY D VM V    FE     MKE  G  FDTDL

1h6za.pdb             172  TASDLKELCDGYLELFELKT-GCSFPQDPVMQLFAAIKAVFRSWGNPRATIYRRMNNITG  230
1kbla.pdb             171  TADDLKELAEKFKAVYKEAMNGEEFPQEPKDQLMGAVKAVFRSWDNPRAIVYRRMNDIPG  230
                           TA DLKEL             G  FPQ P  QL  A KAVFRSW NPRA  YRRMN I G

1h6za.pdb             231  LLG-TA-VNVQAMVFGNINDRSATGVAFSRSPSTGENFFFGEYLVNAQGEDVVAGIRTPQ  288
1kbla.pdb             231  --DWGTAVNVQTMVFGNKGETSGTGVAFTRNPSTGEKGIYGEYLINAQGEDVVAGVRTPQ  288
                                  VNVQ MVFGN    S TGVAF R PSTGE    GEYL NAQGEDVVAG RTPQ

1h6za.pdb             289  QINHSLSLRWAKAHGVGEEERRKRYPSMEEAMPENYRLLCDVRKRLENHYRDMQDLEFTV  348
1kbla.pdb             289  PIT-----------------------QLENDMPDCYKQFMDLAMKLEKHFRDMQDMEFTI  325
                            I                          E  MP  Y    D    LE H RDMQD EFT 

1h6za.pdb             349  QDGRLWLLQCRNGKRTIHAAVRIAIDMVNEGLISREEAVLRIDPYQVDHL  398
1kbla.pdb             326  EEGKLYFLQTRNGKRTAPAALQIACDLVDEGMITEEEAVVRIEAKSLDQL  375
                             G L  LQ RNGKRT  AA  IA D V EG I  EEAV RI     D L


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
################################################EOF#################################################