################################################################################################
# Program: MUSTANG-Lite v0.1: A Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Sun Jul 24 01:34:59 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/PH.html
################################################################################################
#====================================
# Aligned_structures: 13
# 1: 1b55a.pdb
# 2: 1bak.pdb
# 3: 1btn.pdb
# 4: 1dbha.pdb
# 5: 1dro.pdb
# 6: 1dyna.pdb
# 7: 1faoa.pdb
# 8: 1fgya.pdb
# 9: 1fhoa.pdb
# 10: 1foea.pdb
# 11: 1mai.pdb
# 12: 1pls.pdb
# 13: 1qqga.pdb
#
# Length: 337
# Identity: 0/337 ( 0.0%) (Calculated as the percentage of conserved columns in the alignment.)
# Similarity: 1/337 ( 0.3%) (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps: 275/337 ( 81.6%) (Calculated as the percentage of columns with atleast one gap.)
#===========================================ALIGNMENT START=========================================
1b55a.pdb 1 ------------------------------------------------A-AVILESIFLK 11
1bak.pdb 1 ---G---------------------------------S-H--M-G-K---DCIMHGYMSK 16
1btn.pdb 1 -----------------------------------------------------MEGFLNR 7
1dbha.pdb 1 ----------AIKKNEIQKN-IDG-----WEGKDIG----QCC--N-----EFIEGTLTR 33
1dro.pdb 1 ---G----------------------------------SG---TG--A--GEGHEGYVTR 16
1dyna.pdb 1 ------------------------------------------------I-LVIRKGWLTI 11
1faoa.pdb 1 --PSL----------------------------------------------GTKEGYLTK 12
1fgya.pdb 1 -----T-F----------------------------------------F-NPDREGWLLK 13
1fhoa.pdb 1 ---M---------------------------------G-D--T-G-K-LGRIIRHDAFQV 18
1foea.pdb 1 ---------------EFGAVFDQ-LIAEQTGEK---KE--VAD--LS-G-DLLLHTSVIW 35
1mai.pdb 1 ------GLQD-----------DP-DLQAL-----------------------LKGSQLLK 19
1pls.pdb 1 ME----------------------------------------------P-KRIREGYLVK 13
1qqga.pdb 1 --------------------------------------------------DVRKVGYLRK 10
1b55a.pdb 12 RSQQK-KKT----SP------L-----NFKKRLFLLT--V-------HKLSYYE--Y-DF 43
1bak.pdb 17 MGN-PF--------L------T-----QWQRRYFYLF--P-------NRLEWRG-EG--- 43
1btn.pdb 8 KHEWE-------AHN--KKA-S---SRSWHNVYCVIN--N-------QEMGFYK--D--- 40
1dbha.pdb 34 VG-------------------------AKHERHIFLF--D-------GL-ICCK--S-NH 55
1dro.pdb 17 KHE-W------DST--TKKASN---R-SWDKVYMAAK--A-------GRISFYK--D--- 49
1dyna.pdb 12 NN----I--GIM-------------KGGSKEYWFVLT--A-------ENLSWYK--D--- 38
1faoa.pdb 13 QGG------------------L---VKTWKTRWFTLH--R-------NELKYFK--D--- 37
1fgya.pdb 14 LGG------------------R---VKTWKRRWFILT--D-------NCLYYFE--Y--- 38
1fhoa.pdb 19 W-E-GD--------E------P------PKLRYVFLF--R-------NKIMFTE-QDAST 46
1foea.pdb 36 LN----P-------PA-----SLGKWKKEPELAAFVF--K-------TAVVLVYKDG-SK 69
1mai.pdb 20 VK------------SS-----S-----WRRERFYKLQEDC-------KTIWQES-RK-V- 47
1pls.pdb 14 KGS----------V-----------FNTWKPMWVVLL--E-------DGIEFYK--K--- 38
1qqga.pdb 11 PK-------------------------SMHKRFFVLR--AASEAGGPARLEYYE--N--- 38
1b55a.pdb 44 ------------------ERGR--------RGS--KKG----SIDVEKI-TCVET----- 65
1bak.pdb 44 -----EA-------------------------P--Q-S----LLTMEEI-QSVEE----- 60
1btn.pdb 41 --------------------AK--SAAS--GIPYHSEV----PVSLKEA--ICEV----- 65
1dbha.pdb 56 -----GQP---RL-PGASN---A-------EYR--L-KEKFF----R-K-VQIND----- 82
1dro.pdb 50 --------------------QK--GYKSNPELTFRGEP----SYDLQNA--AIEI----- 76
1dyna.pdb 39 --------------------DE--E------KE--KKY----MLSVDNL--KLRD----- 57
1faoa.pdb 38 --------------------QM--S------PE--PIR----ILDLTEC-SAVQF----- 57
1fgya.pdb 39 --------------------TT--D------KE--PRG----IIPLENL--SIRE----- 57
1fhoa.pdb 47 S----PP----------S----Y---------T--HYS----SIRLDKY-N-IRQ----- 66
1foea.pdb 70 -QKKKLVGSHRL-SIYEEW---D-------PFR--F-R----HIPTEAL-QVRAL----- 104
1mai.pdb 48 -----MRS--------------PE-----------S-Q----LFSIEDIQEVRMGHRTEG 72
1pls.pdb 39 --------------------KS--D------NS--PKG----MIPLKGS--TLTS----- 57
1qqga.pdb 39 --------------------EK--KWRHK-SSA--PKR----SIPLESC-FNINK----- 63
1b55a.pdb 66 ---------V-V-PEKNPPPER-QIPRRMEQISIIE-RF-PYPFQVVYD----------- 100
1bak.pdb 61 ---------T---Q-I--------------------K--ERKCLLLKIR-G--------- 75
1btn.pdb 66 ---------A-LDY----K------------------K-KKHVFKLRLS-D--------- 82
1dbha.pdb 83 ---------K---DDTN--------------------E-YKHAFEIILK-D--------- 99
1dro.pdb 77 ---------A-SDY----T------------------K-KKHVLRVKLA-N--------- 93
1dyna.pdb 58 ---------V-E-KGF--M------------------S-SKHIFALFNT-E----Q-RNV 79
1faoa.pdb 58 ---------D-Y-S----Q------------------E-RVNCFCLVFP-F--------- 73
1fgya.pdb 58 ---------V-L-D----P------------------R-KPNCFELYN--P--S-H-KGQ 77
1fhoa.pdb 67 ---------H---T----------------------T--DEDTIVLQPQEP------G-- 82
1foea.pdb 105 ---------P---S-AD-------------------AE-ANAVCEIVHV-KSESEGRP-- 128
1mai.pdb 73 LEKFARDIP------------------------------EDRCFSIVFK-D------Q-- 93
1pls.pdb 58 ---------PCQD-----F--GK----------------RMFVFKITTT-K--------- 75
1qqga.pdb 64 ---------R-A-D----S------------------K-NKHLVALYT--R--------- 78
1b55a.pdb 101 -----------------E-GPLYVFS--P--TEELRKRWIHQLKNVI-RYNSD---L--V 132
1bak.pdb 76 -----------------G-KQFILQC--D--SDPELVQWKKELRDAY-REAQ--Q-L--- 106
1btn.pdb 83 -----------------G-NEYLFQA--K--DDEEMNTWIQAISSA-------------- 106
1dbha.pdb 100 -----------------E-NSVIFSA--K--SAEEKNNW-AALISLQ-YRST-L------ 128
1dro.pdb 94 -----------------G-ALFLLQA--H--DDTEMSQWVTSLKAQSDST-------A-- 122
1dyna.pdb 80 Y--------------K-DYRQLELAC--E--TQEEVDSWKASFLRAGV----------YP 110
1faoa.pdb 74 -------------------RTFYLCA--K--TGVEADEWIKILRWKL-SQI--------- 100
1fgya.pdb 78 VIKACKTEADGRVVEGNH-VVYRISA--P--SPEEKEEW-KSIKASI-SRDP---FY--- 124
1fhoa.pdb 83 -----------------L-PSFRIKPKDFETSEYVRKAWLRDIAEEQ-EKYA--A----- 116
1foea.pdb 129 -----------------E-RVFHLCC--S--SPESRKDFLKSVHSIL-RDKH--R-R--- 159
1mai.pdb 94 -----------------R-NTLDLIA--P--SPADAQHWVQGLRKII-H----------- 119
1pls.pdb 76 -----------------Q-QDHFFQA--A--FLEERDAWVRDINKAI-KCIE--G-L--- 106
1qqga.pdb 79 -----------------D-EHFAIAA--D--SEAEQDSWYQALLQLH------------- 103
w
1b55a.pdb 133 -QKYHPCFWIDGQYL---CCSQTAKNAMGCQI-LEN- 163
1bak.pdb 107 VQ----RVPKMK-NKPRS------------------- 119
1btn.pdb -------------------------------------
1dbha.pdb -------------------------------------
1dro.pdb -------------------------------------
1dyna.pdb 111 -E-R--------------------------------V 113
1faoa.pdb -------------------------------------
1fgya.pdb 125 --------------------------------D---- 125
1fhoa.pdb 117 -------------ER---D------------------ 119
1foea.pdb 160 Q------------------------------------ 160
1mai.pdb -------------------------------------
1pls.pdb 107 E-------------------------HHHHHH----- 113
1qqga.pdb -------------------------------------
#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue = Acidic,{D,E}
# Magenta = Basic,{K,R} and
# Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
################################################EOF#################################################