################################################################################################
# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Fri Jul 22 21:46:23 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/PAC.html
################################################################################################
#====================================
# Aligned_structures: 2
#   1: 1byw.pdb
#   2: 1g28a.pdb
#
# Length:        110
# Identity:       32/110 ( 29.1%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     32/110 ( 29.1%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:            6/110 (  5.5%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1byw.pdb                1  SRKFIIANARVENCAVIYCNDGFCELCGYSRAEVMQRPCTCDFLHGPCTQRRAAAQIAQA   60
1g28a.pdb               1  -KSFVITDPRLPDNPIIFASDRFLELTEYTREEVLGNNC--RFLQGRGTDRKAVQLIRDA   57
                              F I   R      I   D F EL  Y R EV    C   FL G  T R A   I  A

1byw.pdb               61  LLGAEERKVEIAFYRKDGSCFLCLVDVVPVKNEDGAVIMFILNFEVVMEK  110
1g28a.pdb              58  VKEQRDVTVQVLNYTKGGRAFWNLFHLQVMRDENGDVQYFIGVQQEM---  104
                                   V    Y K G  F  L        E G V  FI         


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
################################################EOF#################################################