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# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Fri Jul 22 21:15:36 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/Methyltransf_2.html
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#====================================
# Aligned_structures: 2
#   1: 1fp1d.pdb
#   2: 1fp2a.pdb
#
# Length:        366
# Identity:       90/366 ( 24.6%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     90/366 ( 24.6%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           47/366 ( 12.8%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1fp1d.pdb               1  Q----TEDSACLSAMVLTTNLVYPAVLNAAIDLNLFEIIAKATPPGAFMSPSEIASKLPA   56
1fp2a.pdb               1  -RKPSEIFKAQALLYKHIYAFIDSMSLKWAVEMNIPNIIQNH---GKPISLSNLVSILQ-   55
                                    A                L  A   N   II      G   S S   S L  

1fp1d.pdb              57  STQ-HSDLPNRLDRMLRLLASYSVLTSTTRTIEDGGAERVYGLSMVGKYLVPDESRGYLA  115
1fp2a.pdb              56  --VPSSK-IGNVRRLMRYLAHNGFFEIITK------EEESYALTVASELLVRGSD-LCLA  105
                                S       R  R LA        T        E  Y L      LV       LA

1fp1d.pdb             116  SFTTFLCYPALLQVWMNFKEAVVDED--------------FMG-KDKKMNQIFNKSMVDV  160
1fp2a.pdb             106  PMVECVLDPTLSGSYHELKKWIYEE-DLTLFGVTLGSGFWDFLDKNPEYNTSFNDAMASD  164
                                   P L       K     E                   K    N  FN  M   

1fp1d.pdb             161  CATEMKRMLEIYTGFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDLPQVIENAPPLS  220
1fp2a.pdb             165  SKLINLALRDCDFVFDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDRPQVVENLSGSN  224
                                         F G    VDVGGG G     I    P  K I FD PQV EN     

1fp1d.pdb             221  GIEHVGGDMFASVPQGDAMILKAVCHNWSDEKCIEFLSNCHKALS---PNGKVIIVEFIL  277
1fp2a.pdb             225  NLTYVGGDMFTSIPNADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVI  284
                               VGGDMF S P  DA  LK   HNW D  C   L  C  A       GKV I     

1fp1d.pdb             278  PEEPN--T-SEESKLVSTLDNLMFITVGGRERTEKQYEKLSKLSGFSKFQVACRAFNSLG  334
1fp2a.pdb             285  D-K--KKDENQVTQIKLLMDVNM-ACLNGKERNEEEWKKLFIEAGFQHYKISPLT-GFLS  339
                                              D  M     G ER E    KL    GF            L 

1fp1d.pdb             335  VMEFYK  340
1fp2a.pdb             340  LIEIYP  345
                             E Y 


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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