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# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Sat Jul 23 03:15:59 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/MCR_beta_N.html
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#====================================
# Aligned_structures: 3
#   1: 1e6vb.pdb
#   2: 1e6yb.pdb
#   3: 1mrob.pdb
#
# Length:        187
# Identity:       69/187 ( 36.9%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:    150/187 ( 80.2%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:            4/187 (  2.1%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1e6vb.pdb               1  ----DTVDLYDDRGNCVAEEVPIEVLSPMRNEAIQSIVNDIKRTVAVDLEGIENALQNAT   56
1e6yb.pdb               1  ---SDTVDIYDDRGKLLESNVDIMSLAPTRNAAIQSIIMDTKRSVAVNLAGIQGALASGK   57
1mrob.pdb               1  AKFEDKVDLYDDRGNLVEEQVPLEALSPLRNPAIKSIVQGIKRTVAVNLEGIENALKTAK   60
                               DtVDlYDDRGnlvee Vpie LsP RN AIqSIv diKRtVAVnLeGIenAL  ak

1e6vb.pdb              57  VGGKGMKIPGREMDVDIVDNAEAIADEIEKMIRVYQDDDTNVEPMYDGKRLLVQLPSERV  116
1e6yb.pdb              58  MGGKGRQILGRGLNYDIVGNADAIAENVKKLVQVDEGDDTNVIKVKGGKSLLIQSPKSRI  117
1mrob.pdb              61  VGGPACKIMGRELDLDIVGNAESIAAAAKEMIQVTEDDDTNVELLGGGKRALVQVPSARF  120
                           vGGkg kI GReld DIVgNAeaIA   kkmiqV edDDTNVe   gGKrlLvQ Ps R 

1e6vb.pdb             117  KVMADPYSGTLQAGMAVVHAIIDVCEVDMWDANMVKAAVFGRYPQTIDYFGGNVASMLDV  176
1e6yb.pdb             118  IAGADFMSATTVGAAAVTQTIMDMFGTDPYDAPIVKSAVWGSYPQTMDLMGGQVQGILSI  177
1mrob.pdb             121  DVAAEYSAAPLVTATAFVQAIINEFDVSMYDANMVKAAVLGRYPQSVEYMGANIATMLDI  180
                            v Ad  satlv a AvvqaIid f vdmyDAnmVKaAV GrYPQt dymGgnva mLdi

1e6vb.pdb             177  PMKQEGV  183
1e6yb.pdb             178  PQNNEGL  184
1mrob.pdb             181  PQKLEGP  187
                           Pqk EG 


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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