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# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Sat Jul 23 07:42:01 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/Levi_coat.html
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#====================================
# Aligned_structures: 4
#   1: 1frsa.pdb
#   2: 1msc.pdb
#   3: 1qbea.pdb
#   4: 1unaa.pdb
#
# Length:        147
# Identity:       16/147 ( 10.9%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     68/147 ( 46.3%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           37/147 ( 25.2%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1frsa.pdb               1  -ASNFEEFVL-VD--NGG-TGDVKVAPSNFA--NGVAEW-ISSNSRSQAYKVTCSVRQSS   52
1msc.pdb                1  AS-NFTQFVL-VD--NGG-TGDVTVAPSNFA--NGVAEW-ISSNSRSQAYKVTCSVRQSS   52
1qbea.pdb               1  -A-KLETVTLGNIGK--DGKQTLVLNPRGVNPTNGVASLSQAGAVPALEKRVTVSVSQP-   55
1unaa.pdb               1  -A-TLHSFVL-VD--NGG-TGNVTVVPVSNA--NGVAEW-LSNNSRSQAYRVTASYRASG   51
                            a     fvL vd    g tg v v P   a  NGVAew  s nsrsqay VT Svrqs 

1frsa.pdb              53  ANNRKYTVKVEVPK-VATQVQ----GGVE--LPVAAWRSYMNMELTIPVFATND-DCALI  104
1msc.pdb               53  AQNRKYTIKVEVPKVA-----TQTVGGVE--LPVAARRSYLNMELTIPIFATNS-DCELI  104
1qbea.pdb              56  --NYKVQVKIQNPTAC-T----------C--DPSVTRQAYADVTFSFTQYSTDE-ERAFV   99
1unaa.pdb              52  ADKRKYTIKLEVPKIV-------------ELPVSA-WKAYASIDLTIPIF-AATDDVTVI   96
                             nrKyt K evPk                  p a    Y    ltip f t   d   i

1frsa.pdb             105  VKALQGTFK-TGNPIATAIAANSGIY-  129
1msc.pdb              105  VKAMQGLLK-DGNPIPSAIAANSGIY-  129
1qbea.pdb             100  RTELAALLAS--PLLIDAIDQLNPAY-  123
1unaa.pdb              97  SKSLTGLFK-VGNPIAEAISSQSGFYA  122
                            k l gl k   npi  AI   sg Y 


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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