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# Program: MUSTANG-Lite v0.1: A Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Fri Jul 22 20:56:07 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/LIF_OSM.html
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#====================================
# Aligned_structures: 2
# 1: 1evsa.pdb
# 2: 1lki.pdb
#
# Length: 201
# Identity: 33/201 ( 16.4%) (Calculated as the percentage of conserved columns in the alignment.)
# Similarity: 33/201 ( 16.4%) (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps: 67/201 ( 33.3%) (Calculated as the percentage of columns with atleast one gap.)
#===========================================ALIGNMENT START=========================================
1evsa.pdb 1 GSCSKEYR------------VLLGQLQKQTDLMQD--TSRLLDPYIRIQGLD--VPKLRE 44
1lki.pdb 1 --------NATCAIRHPCHGNLMNQIKNQLAQLNGSAN-ALFISYYTAQG--EPFPNNVE 49
L Q Q L Y QG P E
1evsa.pdb 45 H-CRERPGAFPSEETLRGLGRRGFLQTLNATLGCVLHRLADLEQRLPKAQDLERSGL--- 100
1lki.pdb 50 KLCAPNMTDFPSF--HGNGTEKTKLVELYRMVAYLSASLTNITRDQ-----------KVL 96
C FPS L L L
1evsa.pdb 101 ---NIEDLEKLQMARPNILGLRNNIYCMAQ-LLDN--------------ASDAFQRKLEG 142
1lki.pdb 97 NPTAVSLQVKLNATIDVMRGLLSNVLCRLCNKY--RVGHVDVPPVPDHSDKEAFQRKKLG 154
KL GL N C AFQRK G
1evsa.pdb 143 CRFLHGYHRFMHSVGRVFSKW 163
1lki.pdb 155 CQLLGTYKQVISVVVQAF--- 172
C L Y V F
#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue = Acidic,{D,E}
# Magenta = Basic,{K,R} and
# Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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