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# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Sat Jul 23 07:32:38 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/KISc.html
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#====================================
# Aligned_structures: 4
#   1: 1bg2.pdb
#   2: 2kina.pdb
#   3: 2ncda.pdb
#   4: 3kar.pdb
#
# Length:        443
# Identity:       79/443 ( 17.8%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:    125/443 ( 28.2%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:          159/443 ( 35.9%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1bg2.pdb                1  --------------------------------------------DLA----ECNIKVMCR   12
2kina.pdb               1  -----------------------------------------------ADPAECSIKVMCR   13
2ncda.pdb               1  LRQRTEELLRCNEQQAAELETCKEQLFQSNMERKELHNTVMDLR--------GNIRVFCR   52
3kar.pdb                1  ----------------------------------------------------GNIRVYCR    8
                                                                                nI V CR

1bg2.pdb               13  FRPLNESE-VNRGDK---YIAKFQGE------DTVVIA------------SKPYAFDRVF   50
2kina.pdb              14  FRPLNEAE-ILRGDK---FIPKFKGE------ETVVIG---------Q--GKPYVFDRVL   52
2ncda.pdb              53  IRPPLESE-E-NR-M-C-CTWTYHDE------STVELQSIDAQAKSKM-GQQIFSFDQVF  100
3kar.pdb                9  IRPALKNLE-----NSDTSLINVNEFDDNSGVQSMEVTKIQN-----TAQVHEFKFDKIF   58
                            RP  e e                 e       tv                    FD vf

1bg2.pdb               51  QSSTS---QEQVYNDCAKKIVKDVLEGYNGTIFAYGQTSSGKTHTMEGKLHDPE-GMGII  106
2kina.pdb              53  PPNTT---QEQVYNACAKQIVKDVLEGYNGTIFAYGQTSSGKTHTMEGKLHDPQ-LMGII  108
2ncda.pdb             101  HPLSSQSD----IFEMVSPLIQSALDGYNICIFAYGQTGSGKTYTMDGV----PESVGVI  152
3kar.pdb               59  DQQDTNVD----VFKEVGQLVQSSLDGYNVCIFAYGQTGSGKTFTMLNP----G--DGII  108
                                               v   L GYN  IFAYGQT SGKT TM g         GiI

1bg2.pdb              107  PRIVQDIFNYIYSMDE-NLEFHIKVSYFEIYLDKIRDLLD-VSKTNLSVHEDK--NRVPY  162
2kina.pdb             109  PRIAHDIFDHIYSMDE-NLEFHIKVSYFEIYLDKIRDLLD-VSKTNLAVHEDK--NRVPY  164
2ncda.pdb             153  PRTVDLLFDSIRGYRNLGWEYEIKATFLEIYNEVLYDLLS-NEQKDMEIRMAKNNKNDIY  211
3kar.pdb              109  PSTISHIFNWINKLKTKGWDYKVNCEFIEIYNENIVDLLRS---LKHEIRHDQE-TKTTT  164
                           Pr    iF  I        e  ik    EIY   i DLL            dk      y

1bg2.pdb              163  VKGCTERFVCSPDEVMDTIDEGKSNRH-VAV--TNMNEHSSRSHSIFLINVKQENTQTEQ  219
2kina.pdb             165  VKGCTERFVSSPEEVMDVIDEGKANRH-VAV--TNMNEHSSRSHSIFLINIKQENVETEK  221
2ncda.pdb             212  VSNITEETVLDPNHLRHLMHTAKMNRATAST--A-GNERSSRSHAVTKLELIGRHAEKQE  268
3kar.pdb              165  ITNVTSCKLESEEMVEIILKKANKLR--STASTA-SNEHSSRSHSIFIIHLSGSNAKTGA  221
                           v   Te  v sp  v       k nR          NEhSSRSHsif i     n  t  

1bg2.pdb              220  KLSGKLYLVDLAGSEKV-----------SKTGAEGAVLDEA-KNINKSLSALGNVISALA  267
2kina.pdb             222  KLSGKLYLVDLAGSEKV------------------------AKNINKSLSALGNVISALA  257
2ncda.pdb             269  ISVGSINLVDLAGSESPN--------------------------INRSLSELTNVILALL  302
3kar.pdb              222  HSYGTLNLVDLAGSERI-NVSDRLRETQ---------------NINKSLSCLGDVIHALG  265
                              G l LVDLAGSE                             INkSLS LgnVI AL 

1bg2.pdb              268  EGS---TYVPYRDSKMTRILQDSLGGNCRTTIVICCSPSSYNESETKSTLLFGQRAKTI-  323
2kina.pdb             258  EGTK--THVPYRDSKMTRILQDSLDGNCRTTIVICCSPSVFNEAETKSTLMFGQRAKTIK  315
2ncda.pdb             303  QKQ---DHIPYRNSKLTHLLMPSLGGNSKTLMFINVSPFQDCFQESVKSLRFAASVNSC-  358
3kar.pdb              266  QPDSTKRHIPFRNSKLTYLLQYSLTGDSKTLMFVNISPSSSHINETLNSLRFASKVNS--  323
                                  h PyR SK T  Lq SL Gn  T   i  SPs     Et   L F        

1bg2.pdb                   -----------------------     
2kina.pdb             316  NTVSVNLELTAEEWKKKYEKEKE  338
2ncda.pdb                  -----------------------     
3kar.pdb                   -----------------------     
                                                  


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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