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# Program: MUSTANG-Lite v0.1: A Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Sat Jul 23 02:35:56 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/Huristasin.html
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#====================================
# Aligned_structures: 3
# 1: 1bx7.pdb
# 2: 1skz1.pdb
# 3: 1skz2.pdb
#
# Length: 69
# Identity: 10/ 69 ( 14.5%) (Calculated as the percentage of conserved columns in the alignment.)
# Similarity: 22/ 69 ( 31.9%) (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps: 32/ 69 ( 46.4%) (Calculated as the percentage of columns with atleast one gap.)
#===========================================ALIGNMENT START=========================================
1bx7.pdb 1 GNT-CGGE--TCSAAQVCLK-----------GKCVCN-EVHCRIRCKYGLKKDENGCEYP 45
1skz1.pdb 1 ---GCEEA--GCPEGS---------ACNIITDRCTCS-GVRCRVHCPHGFQRSRYGCEFC 45
1skz2.pdb 1 --------KATCDISE----CPEGMMCSRLTNKCDCKIDINCRKTCPNGLKRDKLGCEYC 48
tC kC C v CR Cp Glkrd GCEyc
1bx7.pdb 46 CSCAK-A-- 51
1skz1.pdb 46 KC-R-LEPM 52
1skz2.pdb 49 EC-R-P--- 52
c r
#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue = Acidic,{D,E}
# Magenta = Basic,{K,R} and
# Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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