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# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Fri Jul 22 20:04:18 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/GFO_IDH_MocA_C.html
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#====================================
# Aligned_structures: 2
#   1: 1gcua.pdb
#   2: 1ofga.pdb
#
# Length:        166
# Identity:       16/166 (  9.6%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     16/166 (  9.6%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           52/166 ( 31.3%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1gcua.pdb               1  MEEFEFLRREVL-G--KELLKGSLRFTASP----------LEEERFGFP--AFSGISRLT   45
1ofga.pdb               1  DPMNRAAVKLIRENQLGKLGMVTTDNSDVMDQNDPAQQWRLRRELAGGGSLMDIGIYGLN   60
                                             L                     L  E  G       GI  L 

1gcua.pdb              46  WLVSLFGELSL-ISATLEERKEDQY------MKMTVQLETQNKGLLSWIEEKGPGLKRNR   98
1ofga.pdb              61  GTRYLLGEEPIEVRAYTYSDPNDE-RFVEVEDRIIWQMRFRSGALSHGASSYS--TTTTS  117
                               L GE      A       D             Q       L               

1gcua.pdb              99  YVNFQFTSGSL-EE-VP--------------SVG-VN---------  118
1ofga.pdb             118  RFSVQGDKAVLLMDPATGYYQNLISVQTPGHANQSM-MPQFIMPAN  162
                               Q     L                                   


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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