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# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Sat Jul 23 02:06:35 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/Filamin.html
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#====================================
# Aligned_structures: 3
#   1: 1ksr.pdb
#   2: 1qfha1.pdb
#   3: 1qfha2.pdb
#
# Length:        128
# Identity:       24/128 ( 18.8%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     46/128 ( 35.9%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           43/128 ( 33.6%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1ksr.pdb                1  ---ADPEKSYAEGPGLDGG--ECFQPSKFKIHAVDPDGVHRTDGGDGFVVTIEGPA-PVD   54
1qfha1.pdb              1  KPAPSAEHSYAEGEGLV--KVFDNAPAEFTIFAVDTKGVARTDGGDPFEVAINGP-DG-L   56
1qfha2.pdb              1  --GANGEDSS-------------FGSFTFTVAAKNKKGEVKTYGGDKFEVSITGPA-E-E   43
                              a  E Sy             f p  Fti Avd kGv rTdGGD FeV I GP     

1ksr.pdb               55  ---PVMVDNGDGTYDVEFEPKEAGDYVINLTLDGDNVNGFPKTVTVK-------------   98
1qfha1.pdb             57  VVDAKVTDNNDGTYGVVYDAPVEGNYNVNVTLRGNPIKNMPIDVKCI-------------  103
1qfha2.pdb             44  I-TLDAIDNQDGTYTAAYSLVGNGRFSTGVKLNGKHIEGSPFKQVLGNPGKKNPEVKSFT  102
                                  DN DGTY v y     G y  nvtL G  i g P  v                

1ksr.pdb               99  ------PA  100
1qfha1.pdb            104  ------E-  104
1qfha2.pdb            103  TTRTAN--  108
                                   


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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