################################################################################################
# Program: MUSTANG-Lite v0.1: A Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Fri Jul 22 19:55:31 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/Fe_hyd_lg_C.html
################################################################################################
#====================================
# Aligned_structures: 2
# 1: 1feha.pdb
# 2: 1hfel.pdb
#
# Length: 412
# Identity: 164/412 ( 39.8%) (Calculated as the percentage of conserved columns in the alignment.)
# Similarity: 164/412 ( 39.8%) (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps: 39/412 ( 9.5%) (Calculated as the percentage of columns with atleast one gap.)
#===========================================ALIGNMENT START=========================================
1feha.pdb 1 KDK----TEY-VDERS-----------KSLTVDRTKCLLCGRCVNACGKNTETYAMKFLN 44
1hfel.pdb 1 ---SRTVMERIEYEMHTPDPKADPDKLHFVQIDEAKCIGCDTCSQYC---P-TAAIFG-E 52
E E D KC C C C T A
1feha.pdb 45 KNGKTIIGAEDEKCFDDTNCLLCGQCIIACPVAALS-EKSHMDRVKNALNAPEKHVIVAM 103
1hfel.pdb 53 M-GEPH----SIPH--IEACINCGQCLTHCPENAIYEAQSWVPEVEKKLKDGKVKCIAMP 105
G C CGQC CP A S V L I
1feha.pdb 104 APSVRASIGELFNMGFGVDVTGKIYTALRQLGFDKIFDINFGADMTIMEEATELVQRIEN 163
1hfel.pdb 106 APAVRYALGDAFGMPVGSVTTGKMLAALQKLGFAHCWDTEFTADVTIWEEGSEFVERLTK 165
AP VR G F M G TGK AL LGF D F AD TI EE E V R
1feha.pdb 164 NG---PFPMFTSCCPGWVRQAENYYPELLNNLSSAKSPQQIFGTASKTYYPSISGLDPKN 220
1hfel.pdb 166 -KSDMPLPQFTSCCPGWQKYAETYYPELLPHFSTCKSPIGMNGALAKTYGAERMKYDPKQ 224
P P FTSCCPGW AE YYPELL S KSP G KTY DPK
1feha.pdb 221 VFTVTVMPCTSKKFEADRPQMEKDGLRDIDAVITTRELAKMIKDAKIPFAKLEDSEADPA 280
1hfel.pdb 225 VYTVSIMPCIAKKYEGLRPELKSSGMRDIDATLTTRELAYMIKKAGIDFAKLPDGKRDSL 284
V TV MPC KK E RP G RDIDA TTRELA MIK A I FAKL D D
1feha.pdb 281 MGEYSGAGAIFGATGGVMEAALRSAKDFAENAELEDIEYKQVRGLNGIKEAEVEINNNKY 340
1hfel.pdb 285 MGESTGGATIFGVTGGVMEAALRFAYEAVTGKKPDSWDFKAVRGLDGIKEATVNVGGTDV 344
MGE G IFG TGGVMEAALR A K VRGL GIKEA V
1feha.pdb 341 NVAVINGASNLFKFMKSGMINEKQYHFIEVMACHGGCVNGGGQPHVNPK--- 389
1hfel.pdb 345 KVAVVHGAKRFKQVCDDVKAGKSPYHFIEYMACPGGCVCGGGQPVMPGVLEA 396
VAV GA YHFIE MAC GGCV GGGQP
#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue = Acidic,{D,E}
# Magenta = Basic,{K,R} and
# Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
################################################EOF#################################################