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# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Sat Jul 23 02:03:59 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/Extradiol_dioxy.html
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#====================================
# Aligned_structures: 3
#   1: 1dhy.pdb
#   2: 1han.pdb
#   3: 1mpya.pdb
#
# Length:        327
# Identity:       43/327 ( 13.1%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:    196/327 ( 59.9%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           64/327 ( 19.6%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1dhy.pdb                1  ---SIERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAG-DAALYRA--DQRAWRIAVQPG   54
1han.pdb                1  ---SIRSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD-NGDLFRI--DSRAWRIAVQQG   54
1mpya.pdb               1  MNKGVMRPGHVQLRVLDMSKALEHYVELLGLIEMDRDDQGRVYLKAWTEVDKFSLVLREA   60
                              si rlGy gfaV Dv aw  flt  lGLmeag  d    l ra  d rawriavq g

1dhy.pdb               55  ELDDLAYAGLEVDDAAALERMADKLRQAGVAFTRGDEALMQQR-KVMGLLCLQDPFGLPL  113
1han.pdb               55  EVDDLAFAGYEVADAAGLAQMADKLKQAGIAVTTGDASLARRR-GVTGLITFADPFGLPL  113
1mpya.pdb              61  DEPGMDFMGFKVVDEDALRQLERDLMAYGCAVEQLPAGEL---NSCGRRVRFQAPSGHHF  117
                           e ddlafaG eV DaaaL qmadkL qaG Avt gda l      v gl  fqdPfGlpl

1dhy.pdb              114  EIYYGPAEIF------HEP----FLPSAPVSGFVTGDQGIGHFVRCVPDTAKAMAFYTEV  163
1han.pdb              114  EIYYGASEVF------EKP----FLPGAAVSGFLTGEQGLGHFVRCVPDSDKALAFYTDV  163
1mpya.pdb             118  ELYADKEYTGKWGLNDVNPEAWPRDLKGMA-AV-----RFDHALMYGDELPATYDLFTKV  171
                           EiYyg  e f        P    flp a v gf     g gHfvrcvpd  ka afyT V

1dhy.pdb              164  LGFVLSDIIDI-------V----PAHFLHCNGRHHTIALAAFPIPKRIHHFMLQANTIDD  212
1han.pdb              164  LGFQLSDVIDMKMGPDVTV----PAYFLHCNERHHTLAIAAFPLPKRIHHFMLEVASLDD  219
1mpya.pdb             172  LGFYLAEQVL-DE------NGTRVAQFLSLSTKAHDVAFIHHPEKGRLHHVSFHLETWED  224
                           LGF Lsd id             pA FLhcn rhHt A aafP pkRiHHfml   t dD

1dhy.pdb              213  VGYAFDRLDA-AGRITSLLGRHTNDQTLSFYADTPSPMIEVEFGWGPRTV---WTVARHS  268
1han.pdb              220  VGFAFDRVDA-DGLITSTLGRHTNDHMVSFYASTPSGV-EVEYGWSARTVDRSWVVVRHD  277
1mpya.pdb             225  LLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGN-RNEVFCGGDYNYPDHKPVTWT  283
                           vg AfDr da dg Its lgRHtndh  sfYa tPSg  evE gwg rtv   w vvrh 

1dhy.pdb              269  ------RTAMWG---HKSV--------  278
1han.pdb              278  ------SPSMWG---HKSV--------  287
1mpya.pdb             284  TDQLGKAIFYHDRILN---ERFMTVLT  307
                                    mwg   h           


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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