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# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Fri Jul 22 19:48:01 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/ETF_beta.html
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#====================================
# Aligned_structures: 2
#   1: 1efpb.pdb
#   2: 1efvb.pdb
#
# Length:        252
# Identity:      144/252 ( 57.1%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:    144/252 ( 57.1%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:            6/252 (  2.4%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1efpb.pdb               1  MKVLVPVKRLIDYNVKARVKSDGSGVDLANVKMSMNPFDEIAVEEAIRLKEKGQAEEIIA   60
1efvb.pdb               1  LRVLVAVKRVIDYAVKIRVKPDRTGVVTDGVKHSMNPFCEIAVEEAVRLKEKKLVKEVIA   60
                             VLV VKR IDY VK RVK D  GV    VK SMNPF EIAVEEA RLKEK    E IA

1efpb.pdb              61  VSIGVKQAAETLRTALAMGADRAILVVAADDVQQDIEPLAVAKILAAVARAEGTELIIAG  120
1efvb.pdb              61  VSCGPAQCQETIRTALAMGADRGIHVEVPPAEAERLGPLQVARVLAKLAEKEKVDLVLLG  120
                           VS G  Q  ET RTALAMGADR I V           PL VA  LA  A  E   L   G

1efpb.pdb             121  KQAIDNDMNATGQMLAAILGWAQATFASKVEIEGAKAKVTREVDGGLQTIAVSLPAVVTA  180
1efvb.pdb             121  KQAIDDDCNQTGQMTAGFLDWPQGTFASQVTLEGDKLKVEREIDGGLETLRLKLPAVVTA  180
                           KQAID D N TGQM A  L W Q TFAS V  EG K KV RE DGGL T    LPAVVTA

1efpb.pdb             181  DLRLNEPRYASLPNIMKAKKKPLDEKTAADYGVDVAPRLEVVSVREPEGRKAGIKVGSVD  240
1efvb.pdb             181  DLRLNEPRYATLPNIMKAKKKKIEVIKPGDLGVDLTSKLSVISVEDPPQRTAGVKVETTE  240
                           DLRLNEPRYA LPNIMKAKKK        D GVD    L V SV  P  R AG KV    

1efpb.pdb             241  ELVGKL------  246
1efvb.pdb             241  DLVAKLKEIGRI  252
                            LV KL      


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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