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# Program: MUSTANG-Lite v0.1: A Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Fri Jul 22 19:21:32 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/DAP_epimerase.html
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#====================================
# Aligned_structures: 2
# 1: 1bwza1.pdb
# 2: 1bwza2.pdb
#
# Length: 159
# Identity: 18/159 ( 11.3%) (Calculated as the percentage of conserved columns in the alignment.)
# Similarity: 18/159 ( 11.3%) (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps: 46/159 ( 28.9%) (Calculated as the percentage of columns with atleast one gap.)
#===========================================ALIGNMENT START=========================================
1bwza1.pdb 1 MT--GEATHIY--------------DGFIT--LMQFSKMHGLGNDFVVVDGV---TQNVF 39
1bwza2.pdb 1 --NMGEPIWEPAKIPFTANKFEKNYILRTDIQTVLCG-AVSMGNPHCVVQVDDIQTAN-- 55
GE GN VV T N
1bwza1.pdb 40 FTPETIRRLANR-HC-GIGFDQLLIVEAPYDPELDFHYRIFNADGSEVSQCG--NGARCF 95
1bwza2.pdb 56 -VEQLGPLLESHERFPE--RVNAGFMQI-INKE-HIKLRVYERG-AGETQ-ACGSGACAA 108
L E R Q GA
1bwza1.pdb 96 ARFVTLKGLTNKKDISVSTQKGNMVLTVKDMNQIR---- 130
1bwza2.pdb 109 VAVGIMQGLL-NNNVQVDLPGGSLMIEWNGV----GHPL 142
GL V G
#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue = Acidic,{D,E}
# Magenta = Basic,{K,R} and
# Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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