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# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Sat Jul 23 01:48:08 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/DAHP_synth_1.html
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#====================================
# Aligned_structures: 3
#   1: 1fxqa.pdb
#   2: 1g7va.pdb
#   3: 1gg1a.pdb
#
# Length:        384
# Identity:       21/384 (  5.5%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:    132/384 ( 34.4%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:          151/384 ( 39.3%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1fxqa.pdb               1  ------------------------------------------------EKFLVIAGPCAI   12
1g7va.pdb               1  -------MKQKVVSIG----DINVA---------------------NDLPFVLFGGMNVL   28
1gg1a.pdb               1  DLRIKEIKELLPPV--ALLEKFPATENAANTVAHARKAIHKILKGND-DRLLVVIGPCSI   57
                                                                             flv  Gpc i

1fxqa.pdb              13  ESEELLLKVGEEIKRLSEKFK-EVEFVFKSSFDKANRSSIHSFRGH--------------   57
1g7va.pdb              29  ESRDLAMRICEHYVTVTQKLG--IPYVFKASFDKANRSSIHSYRGP--------------   72
1gg1a.pdb              58  HDPVAAKEYATRLLALREELKDELEIVMRVYFE--KPRTTVGWKG-LINDPHMDNSFQIN  114
                           es  la    e    l eklk   e Vfk sFd  nrssihs rG               

1fxqa.pdb              58  -GLEYGVKALRKVKEEFGLKITTDIHESWQAEPVAEVADIIQIPAFLCRQTDLLLAAAKT  116
1g7va.pdb              73  -GLEEGMKIFQELKQTFGVKIITDVHEPSQAQPVADVVDVIQLPAFLARQTDLVEAMAKT  131
1gg1a.pdb             115  DGLRIARKLLLDIND-SGLPAAGEFLDMITPQYLADLMSWGAIGARTTESQVHRELASGL  173
                            GLe g K l   k  fGlki td he  qaqpvAdv d iqipAfl rqtdl eaaakt

1fxqa.pdb             117  GRAVNVKKGQFLAPWDTKNVVEKLKFG------------------GAKEIYLTERGTTFG  158
1g7va.pdb             132  GAVINVKKPQFVSPGQMGNIVDKFKEG------------------GNEKVILCDRGANFG  173
1gg1a.pdb             174  SCPVGFKNGTDGTIKVAIDAINAAGAPHCFLSVTKWGHSAIVNTSGNGDCHIILRGGK--  231
                           g  vnvKkgqf  p    n v k k g                  Gn    l  RG    

1fxqa.pdb             159  YNNLVVDFRSLPIMKQ-W------AKVIYDATHSVQLPGGLGDKSG---GMR-------E  201
1g7va.pdb             174  YDNLVVDMLGFSIMKKVSG---N-SPVIFDVTHALQC---------RDP-FGAASGGRRA  219
1gg1a.pdb             232  -EPN-YSAKHVAEVKEGLNKAGLPAQVMIDFSHAN------------SSKQF-------K  270
                             nl vd     imK         a Vi D tHa                          

1fxqa.pdb             202  FIFPLIRAAVAVG------CDGVFMETHPEPE---K---------ALSDASTQLPLSQLE  243
1g7va.pdb             220  QVAELARAGMAVG------LAGLFIEAHPDPEHAK----------CDG--PSALPLAKLE  261
1gg1a.pdb             271  KQMDVCADVCQQIAGGEKAIIGVMVESHLVEG---NQSLPLAYGKSIT--DACIGWEDTD  325
                               l ra  avg        Gvf E Hp pe                     lpl  le

1fxqa.pdb             244  GIIEAILEIREVASKYYETI----  263
1g7va.pdb             262  PFLKQMKAIDDLVKGFEE-LDTSK  284
1gg1a.pdb             326  ALLRQLANAVKARR----------  339
                             l q   i               


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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