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# Program: MUSTANG-Lite v0.1: A Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Sat Jul 23 09:42:57 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/ChtBD.html
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#====================================
# Aligned_structures: 5
# 1: 1hev.pdb
# 2: 1wgta1.pdb
# 3: 1wgta2.pdb
# 4: 1wgta3.pdb
# 5: 1wgta4.pdb
#
# Length: 46
# Identity: 16/ 46 ( 34.8%) (Calculated as the percentage of conserved columns in the alignment.)
# Similarity: 26/ 46 ( 56.5%) (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps: 6/ 46 ( 13.0%) (Calculated as the percentage of columns with atleast one gap.)
#===========================================ALIGNMENT START=========================================
1hev.pdb 1 E-QCGRQAGGKLCPNNLCCSQWGWCGSTDEYCSPDHNCQ-SNCKD- 43
1wgta1.pdb 1 --RCGEQGSGMECPNNLCCSQYGYCGMGGDYCGKG--CQNGACWTS 42
1wgta2.pdb 1 -KRCGSQAGGKTCPNNHCCSQYGHCGFGAEYCGAG--CQGGPCRAD 43
1wgta3.pdb 1 -IKCGSQAGGKLCPNNLCCSQWGYCGLGSEFCGEG--CQNGACSTD 43
1wgta4.pdb 1 -KPCGKDAGGRVCTNNYCCSKWGSCGIGPGYCGAG--CQSGGCDG- 42
CG qagG CpNN CCSq G CG g yCg g CQ g C
#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue = Acidic,{D,E}
# Magenta = Basic,{K,R} and
# Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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