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# Program: MUSTANG-Lite v0.1: A Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Fri Jul 22 19:04:08 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/CCP_MauG_C.html
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#====================================
# Aligned_structures: 2
# 1: 1eb7a.pdb
# 2: 1iqca.pdb
#
# Length: 166
# Identity: 60/166 ( 36.1%) (Calculated as the percentage of conserved columns in the alignment.)
# Similarity: 60/166 ( 36.1%) (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps: 21/166 ( 12.7%) (Calculated as the percentage of columns with atleast one gap.)
#===========================================ALIGNMENT START=========================================
1eb7a.pdb 1 TPDSPFDLYLKGDDKALDAQQKKGLKAFMDSGCSACHNGINLGGQAYFPF-G---LV-KK 55
1iqca.pdb 1 TPGSKFDKWLEGDKNALNQDELEGYNLFKGSGCVQCHNGPAVGGSSYQKMGVFKPYETKN 60
TP S FD L GD AL G F SGC CHNG GG Y K
1eb7a.pdb 56 PDA----DKGRFAVTKTQSDE--YVFRAAPLRNVALTAPYFHSGQVWELKDAVAIMGNAQ 109
1iqca.pdb 61 ---PAAGRMDVT-----GNEADRNVFKVPTLRNIELTYPYFHDGGAATLEQAVETMGRIQ 112
VF LRN LT PYFH G L AV MG Q
1eb7a.pdb 110 LGKQLAPDDVENIVAFLHSLSGKQPRVEYPLLPASTETTPRPAE-- 153
1iqca.pdb 113 LNREFNKDEVSKIVAFLKTLTGDQPDFKLPILPPSNNDTPRSQPYE 158
L D V IVAFL L G QP P LP S TPR
#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue = Acidic,{D,E}
# Magenta = Basic,{K,R} and
# Green = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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