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# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Fri Jul 22 19:03:54 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/CCP_MauG.html
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#====================================
# Aligned_structures: 2
#   1: 1eb7a.pdb
#   2: 1iqca.pdb
#
# Length:        179
# Identity:       59/179 ( 33.0%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     59/179 ( 33.0%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           44/179 ( 24.6%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1eb7a.pdb               1  DALHDQAS--ALFKPIPEQVTELRGQPISEQQRELGKKLFFDPRLSRSHVLSCNTCHNVG   58
1iqca.pdb               1  --------ANEPIQPIKAV-TP-----ENADMAELGKMLFFDPRLSKSGFISCNSCHNLS   46
                                         PI    T            ELGK LFFDPRLS S   SCN CHN  

1eb7a.pdb              59  TGGADNVPTS-VGHGWQKG----PRNSPTVFNAVFNAAQFWDGRAKDLGEQA-K---GPI  109
1iqca.pdb              47  MGGTDNITTSIG-HK----WQQGPINAPTVLNSSMNLAQFWD--------GRAKDLKEQA   93
                            GG DN  TS   H         P N PTV N   N AQFWD           K      

1eb7a.pdb             110  QNSVEM----HSTPQLVEQTLGSIPEYVDAFRKAFPKAGKPVSFDNMALAIEAYEATLV  164
1iqca.pdb              94  AGPIANPKEMASTHEIAEKVVASMPQYRERFKKVFG-SD-EVTIDRITTAIAQFEETLV  150
                                      ST    E    S P Y   F K F      V  D    AI   E TLV


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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