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# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Sat Jul 23 01:06:29 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/Binary_toxA.html
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#====================================
# Aligned_structures: 3
#   1: 1g24a.pdb
#   2: 1qs1a1.pdb
#   3: 1qs1a2.pdb
#
# Length:        243
# Identity:       21/243 (  8.6%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     99/243 ( 40.7%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           70/243 ( 28.8%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1g24a.pdb               1  AYS-NTYQEFTNI---DQAKAWGNAQYKKYG--LSKSEKEAIVSYTK-SAS--EINGKLR   51
1qs1a1.pdb              1  ---TDKVEDFKED--KEKAKEWGKEKEKEWK--LTATEKGKMNNFLD-N--KNDIKTNYK   50
1qs1a2.pdb              1  ------SLDFKNDIN-AEAHSWGMKNYEEWAKDLTDSQREALDGYARQDYK--EINNYLR   51
                                   dFknd     Ak WG   ykew   Lt sekea   y        eIn  lr

1g24a.pdb              52  QN----KGVING-FPSNLIKQVELLDKSFNKMKTPENIMLFRGDDPAYLGTEFQNT----  102
1qs1a1.pdb             51  EITFSMA-----GSFEDEIKDLKEIDKMFDKTNLSNSIITYKNVEPTTIGF-----N---   97
1qs1a2.pdb             52  NQ----GGS----GNEKLDAQIKNISDALGKKPIPENITVYRWCGMPEFGY-----QISD   98
                                          e likq k idk f K   penI  yr   p   G          

1g24a.pdb             103  --LLNSNGTINKTAFEKAKAKFLNKDRLEYGYISTSLMNVS-Q--FA-GRPIITKFKVAK  156
1qs1a1.pdb             98  KSLT-EGNTINSDAMAQFKEQFLDRDIKFDSYLDTHLTAQQVS----SKERVILKVTVPS  152
1qs1a2.pdb             99  -------PLP---SLKDFEEQFLNTIKEDKGYMSTSLSSER-LAAFG-SRKIILRLQVPK  146
                                   ti   a   fkeqFLn d    gY sTsL            r iIlk  Vpk

1g24a.pdb             157  G------SKAGYID-PISAFAGQLEMLLPRHSTYHIDDMRLS-S-DGKQIIITATMMGTA  207
1qs1a1.pdb            153  GKGSTTPTKAGVILNNS-----EYKMLIDNGYMVHVDKVSKVVKKGVECLQIEGTLKK--  205
1qs1a2.pdb            147  G------STGAYLS-AIGGFASEKEILLDKDSKYHIDKVTEVIIKGVKRYVVDATLLT--  197
                           G      skagyi   i     e emLld  s yHiDkv  v   gvk   i aTl    

1g24a.pdb             208  INP  210
1qs1a1.pdb                 ---     
1qs1a2.pdb                 ---     
                              


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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