################################################################################################
# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Fri Jul 22 18:38:54 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/Anperoxidase.html
################################################################################################
#====================================
# Aligned_structures: 2
#   1: 1cqea.pdb
#   2: 1mhla.pdb
#
# Length:        652
# Identity:       83/652 ( 12.7%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     83/652 ( 12.7%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:          224/652 ( 34.4%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1cqea.pdb               1  IWTWLR-TTLR--PSPSFIHFLLTHGRWLWDFVNATFIRDTLMRLVLTVRSNLIPSPPTY   57
1mhla.pdb               1  ------CPEQDKYRTIT-------------GMCNNR------------------------   17
                                                            N                          

1cqea.pdb              58  NIAHDYI-SWESFSNV-SYYTRILPSVPRD---CPTP--MGTK-GK-KQLPDAEFLSRRF  108
1mhla.pdb              18  -------RSPT-LGASNRAFVRWLPAEY-EDGFSLPYGWTPGVKRNGFPVALARAVSNEI   68
                                   S            R LP                           A   S   

1cqea.pdb             109  LLRR--KFIPDPQGTNLMFAFFAQHFTHQFFKTSGK------MGP---------------  145
1mhla.pdb              69  VRFPTDQLTPDQE-RSLMFMQWGQLLDHDLDFTPEPAVNCETSCVQQPPCFPLKIPPNDP  127
                                    PD     LMF    Q   H    T                           

1cqea.pdb             146  ---------------------------GFTKALGHGVDLGHIYGDNLERQYQLRLF-K-D  176
1mhla.pdb             128  RIKNQADCIPFFRSCPACPGSNITIRNQINA-LTSFVDASMVYGSEEPLARNLRNMSNQL  186
                                                           L   VD    YG        LR      

1cqea.pdb             177  GKLKY---QMLNGEVYPPSVEEAPVLM--------HYPRGIPPQ-SQMAVGQEVFGLLPG  224
1mhla.pdb             187  GLLAVNQRFQDNGRALLPF-D------NLHDDPCLLTNRSAR--IPCFLAGDTRSSEMPE  237
                           G L        NG    P                    R           G       P 

1cqea.pdb             225  LMLYATIWLREHNRVCDLLKAEHPTWGDEQLFQTARLILIGETIKIVIEEYVQQLSGY--  282
1mhla.pdb             238  LTSMHTLLLREHNRLATELKSLNPRWDGERLYQEARKIVGAMVQIITYRDYLPLVLGPTA  297
                           L    T  LREHNR    LK   P W  E L Q AR I       I    Y     G   

1cqea.pdb             283  ----FLQLKFDPELLFGAQFQYR--NRIAMEFNQLYH-WHPLMPDSFRVGP---------  326
1mhla.pdb             298  MRKYL-PTYRSY--NDS------VDPRIANVFTNAFRYGHTLIQPFMFRL-DNRYQPMEP  347
                                                     RIA  F       H L                  

1cqea.pdb             327  -QDYSYEQFLFNTSMLVD-YGVEALVDAFSRQPAGRIGGGRNIDHHIL------------  372
1mhla.pdb             348  NPRVPLSRVFFASWRVVLEGGIDPILRGLMATPAKLNRQNQIAVDEIRERLFEQVMRIGL  407
                                     F     V   G           PA            I             

1cqea.pdb             373  HVAVDVIKESRVLRLQPFNEYRKRFGMKPY----TSFQELTGEKEMAAELEELYGDIDAL  428
1mhla.pdb             408  DLPALNMQRSRDHGLPGYNAWRRFCGLPQPETVGQL-GTVLRNLKLARKLMEQYGTPNNI  466
                                    SR   L   N  R   G                    A  L E YG     

1cqea.pdb             429  EFYPGLLLEKCHPNSIFGESMIEMGAPFSLKGLLGNPIC--SPEYWKASTFGGEVGFNLV  486
1mhla.pdb             467  DIWMGGVSEPLKRKGRVGPLLACIIGTQFRKLRDGDRFWWENEGVFS-----MQQR-QAL  520
                               G   E        G            K   G                         

1cqea.pdb             487  KTATLKKLVCLNTKT-CPYVSFHVP---------------------------  510
1mhla.pdb             521  AQISLPRIICDNTGITTVSKNN-I-FMSNSYPRDFVNCSTLPALNLASWREA  570
                               L    C NT                                       


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
################################################EOF#################################################