################################################################################################
# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Fri Jul 22 18:20:32 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/Aldolase_II.html
################################################################################################
#====================================
# Aligned_structures: 2
#   1: 1fua.pdb
#   2: 1jdia.pdb
#
# Length:        225
# Identity:       52/225 ( 23.1%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     52/225 ( 23.1%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:           21/225 (  9.3%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1fua.pdb                1  MERNKLARQIIDTCLEMTRLGLNQGTAGNVSVRY--QDGMLITPTGIPYEKLTESHIVFI   58
1jdia.pdb               1  M-LEDLKRQVLEANLALPKHNLVTLTWGNVSAVDRERGVFVIKPSGVDYSIMTADDMVVV   59
                           M    L RQ     L      L   T GNVS          I P G  Y   T    V  

1fua.pdb               59  DGNG-KHEE-GKLPSSEWRFHMAAYQSRPDANAVVHNHAVHCTAVSILNRSIPAIHYMIA  116
1jdia.pdb              60  SIETGEVVEGAKKPSSDTPTHRLLYQAFPSIGGIVHTHSRHATIWAQAGQSIPATGTTHA  119
                                   E  K PSS    H   YQ  P     VH H  H T       SIPA     A

1fua.pdb              117  AAGGNSIPCAPYA-TF---GTRELSEHVALALK----------NRKATLLQHHGLIACEV  162
1jdia.pdb             120  DYFYGTIPCTRKMTDAEING-EYEWETGNVIVETFEKQGIDAAQMPGVLVHSHGPFAWGK  178
                                 IPC          G     E                      L   HG  A   

1fua.pdb              163  NLEKALWLAHEVEVLAQLYLTTLAITDPVPVLSDEEIAVVLEKF-  206
1jdia.pdb             179  NAEDAVHNAIVLEEVAYMGIFCRQLAPQLPDMQQTLLNKHYLRKH  223
                           N E A   A   E  A             P               


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
################################################EOF#################################################