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# Program: MUSTANG-Lite v0.1: A  Multiple structural alignment algorithm
# Authors: A. S. Konagurthu, A. M. Lesk, J. C. Whisstock, and P. J. Stuckey
# Rundate: Sat Jul 23 13:23:30 2005
# Report_file: /mnt/EXTRA_STORAGE/MUSTANG_RESULTS/HOMSTRAD_Datasets/results/Acetyltransf.html
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#====================================
# Aligned_structures: 6
#   1: 1b87a.pdb
#   2: 1bo4a.pdb
#   3: 1cjwa.pdb
#   4: 1cm0a.pdb
#   5: 1qsta.pdb
#   6: 1ygha.pdb
#
# Length:        239
# Identity:        1/239 (  0.4%)  (Calculated as the percentage of conserved columns in the alignment.)
# Similarity:     10/239 (  4.2%)  (Calculated as the percentage of semi-conserved columns in the alignment)
# Gaps:          128/239 ( 53.6%)  (Calculated as the percentage of columns with atleast one gap.)

#===========================================ALIGNMENT START=========================================


1b87a.pdb               1  ------MIISEFDR----N----NPVLKDQLSDLLRLTWP--EEYG-D----SSAEEVEE   39
1bo4a.pdb               1  G----IIRTCRLGP----D----QVKSMRAALDLFGREFGDVATYSQ--HQPDSDYLGNL   46
1cjwa.pdb               1  -HTLPANEFRCLT-----------PEDAAGVFEIEREAFI--SVSG--NCPLNLDEVQHF   44
1cm0a.pdb               1  K----VIEFHVVGNSLNQKPNKKILMWLVGLQNVFSHQLP--RM--------PKEYITRL   46
1qsta.pdb               1  ------LDFDILTN----DGTHRNMKLLIDLKNIFSRQLP--KM--------PKEYIVKL   40
1ygha.pdb               1  -----KIEFRVVNN----DNTKENMMVLTGLKNIFQKQLP--KM--------PKEYIARL   41
                                                                                       

1b87a.pdb              40  MMNPER---IAVAAVDQ-DELVGFIGAIP-QYG-------------I--TGWELHPLVVE   79
1bo4a.pdb              47  LRSKTF---IALAAFDQ-EAVVGALAAYVLPK------------FEQPRSEIYIYDLAVS   90
1cjwa.pdb              45  LTL---CPELSLGWFVE-GRLVAFIIGSLWDEERLTQESLALHRPRG--HSAHLHALAVH   98
1cm0a.pdb              47  VFDPKH---KTLALIKD-GRVIGGICFRMF-P-------------SQ--GFTEIVFCAVT   86
1qsta.pdb              41  VFDRHH---ESMVILKNKQKVIGGICFRQY-K-------------PQ--RFAEVAFLAVT   81
1ygha.pdb              42  VYDRSH---LSMAVIRKPLTVVGGITYRPF-D-------------KR--EFAEIVFCAIS   82
                                                 g i                                av 

1b87a.pdb              80  SSRRKNQIGTRLVNYLEKEVAS-RG-GITIYLGTDDLD-HGTTLSQTDLYEHTFDKVASI  136
1bo4a.pdb              91  GEHRRQGIATALINLLKHEANA-LG-AYVIYVQADY-GD---------------------  126
1cjwa.pdb              99  RSFRQQGKGSVLLWRYLHHVGA-QPAVRRAVLMCED------------------------  133
1cm0a.pdb              87  SNEQVKGYGTHLMNHLKEYHIK-HD-ILNFLTYADE------------------------  120
1qsta.pdb              82  ANEQVRGYGTRLMNKFKDHMQK-QN-IEYLLTYADN------------------------  115
1ygha.pdb              83  STEQVRGYGAHLMNHLKDYVRNTSN-IKYFLTYADN------------------------  117
                                 g g  L n                    d                         

1b87a.pdb             137  QNLREHPYEFYEKLGYKIV--GVL-PN-----ANGWD-KPDIWMAKTIIP-R--PDS--  181
1bo4a.pdb             127  ---------------------------------D--P-AVALYTKL-------------  136
1cjwa.pdb             134  -----ALVPFYQRFGFHPA--GPC-AI-----VV--GSLTFTEMHCSL-----------  166
1cm0a.pdb             121  -----YAIGYFKKQGFSKEIKIPKTKYVGYIKDY--E--GATLMGCELNPR--------  162
1qsta.pdb             116  -----FAIGYFKKQGFTKEHRMPQEKWKGYIKDY--D--GGTLMECYIHPYVDY-----  160
1ygha.pdb             118  -----YAIGYFKKQGFTKEITLDKSIWMGYIKDY--E--GGTLMQCSMLPR---IRYLD  164
                                                                      m               


#=========================================ALIGNMENT END=============================================
#LEGEND:
#
# Colours indicate the chemical nature of the amino acid;
# Red         = small hydrophobic including aromatic,{A,F,I,L,M,P,V,W}
# Blue        = Acidic,{D,E}
# Magenta     = Basic,{K,R} and
# Green       = Basic amino acids with hydroxyl groups and/or amine groups {C,G,H,N,Q,S,T,Y}.
#
# The "markup row" below each stretch of the multiple alignment is used to mark completely conserved
# residue (denoted in UPPERCASE) and semi-conserved reside ( denoted in lowercase) in a column of the alignment.
#
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