# MMLSUM Exp_Change = 0.7 log odds matrix (in 1/4-bit units)
# Default Gap-open  = 19
# Default Gap-extn  = 2
# Notes: Matrix derived from MMLSUM (t = 140) Markov Matrix
# File generated on: 2020/10/02 12:50:15
     A   R   N   D   C   Q   E   G   H   I   L   K   M   F   P   S   T   W   Y   V   
A    7  -2  -2  -3   0  -1  -1   0  -3  -2  -2  -1  -1  -4  -1   1  -1  -5  -4   0
R   -2  10  -1  -2  -5   2   0  -4   1  -5  -4   4  -3  -5  -3  -1  -2  -4  -2  -5
N   -2  -1  10   3  -5   0   0   0   1  -6  -7   1  -4  -6  -2   1   0  -6  -2  -6
D   -3  -2   3  11  -8   0   3  -1  -2  -9  -9   0  -7  -9  -2   0  -1  -8  -6  -8
C    0  -5  -5  -8  19  -6  -8  -6  -4  -2  -1  -7  -1  -1  -7  -1  -2  -3  -2  -1
Q   -1   2   0   0  -6   9   3  -4   1  -5  -4   2  -1  -5  -2   0   0  -5  -2  -4
E   -1   0   0   3  -8   3   9  -4  -1  -7  -6   2  -4  -7  -2   0  -1  -7  -5  -5
G    0  -4   0  -1  -6  -4  -4  11  -4  -8  -8  -4  -6  -7  -3   0  -3  -8  -6  -7
H   -3   1   1  -2  -4   1  -1  -4  14  -5  -4   0  -3  -2  -4  -1  -2  -2   2  -5
I   -2  -5  -6  -9  -2  -5  -7  -8  -5   8   4  -5   3   1  -5  -5  -2  -3  -3   5
L   -2  -4  -7  -9  -1  -4  -6  -8  -4   4   8  -5   4   2  -6  -5  -3  -2  -2   2
K   -1   4   1   0  -7   2   2  -4   0  -5  -5   9  -3  -7  -1   0  -1  -7  -4  -5
M   -1  -3  -4  -7  -1  -1  -4  -6  -3   3   4  -3  12   1  -6  -3  -2  -1  -1   1
F   -4  -5  -6  -9  -1  -5  -7  -7  -2   1   2  -7   1  11  -5  -5  -4   3   5   0
P   -1  -3  -2  -2  -7  -2  -2  -3  -4  -5  -6  -1  -6  -5  13  -1  -2  -7  -5  -4
S    1  -1   1   0  -1   0   0   0  -1  -5  -5   0  -3  -5  -1   7   3  -5  -3  -4
T   -1  -2   0  -1  -2   0  -1  -3  -2  -2  -3  -1  -2  -4  -2   3   8  -5  -3  -1
W   -5  -4  -6  -8  -3  -5  -7  -8  -2  -3  -2  -7  -1   3  -7  -5  -5  19   4  -4
Y   -4  -2  -2  -6  -2  -2  -5  -6   2  -3  -2  -4  -1   5  -5  -3  -3   4  12  -3
V    0  -5  -6  -8  -1  -4  -5  -7  -5   5   2  -5   1   0  -4  -4  -1  -4  -3   8