# MMLSUM Exp_Change = 0.5 log odds matrix (in 1/4-bit units)
# Default Gap-open  = 24
# Default Gap-extn  = 4
# Notes: Matrix derived from MMLSUM (t = 74) Markov Matrix
# File generated on: 2020/10/02 12:50:15
     A   R   N   D   C   Q   E   G   H   I   L   K   M   F   P   S   T   W   Y   V   
A   10  -4  -5  -7  -2  -3  -3  -2  -6  -5  -4  -3  -3  -6  -3   0  -3  -8  -6  -1
R   -4  13  -3  -5  -8   1  -1  -7  -1  -8  -6   4  -5  -9  -6  -3  -4  -6  -4  -8
N   -5  -3  14   2  -8  -1  -2  -2  -1 -10 -11  -1  -7  -9  -5   0  -2 -10  -4 -10
D   -7  -5   2  13 -12  -2   2  -4  -4 -14 -13  -2 -11 -13  -5  -1  -3 -12  -9 -14
C   -2  -8  -8 -12  21 -10 -13 -10  -7  -5  -4 -12  -4  -4 -11  -3  -5  -6  -5  -3
Q   -3   1  -1  -2 -10  14   3  -7   0  -9  -6   2  -2  -9  -4  -2  -2  -8  -5  -7
E   -3  -1  -2   2 -13   3  12  -7  -4 -11 -10   1  -7 -12  -4  -2  -3 -11  -8  -8
G   -2  -7  -2  -4 -10  -7  -7  13  -6 -13 -12  -7  -9 -10  -5  -2  -6 -11 -10 -11
H   -6  -1  -1  -4  -7   0  -4  -6  18  -9  -7  -2  -6  -4  -7  -4  -5  -4   1  -8
I   -5  -8 -10 -14  -5  -9 -11 -13  -9  11   3  -8   2  -1  -8  -8  -4  -6  -6   5
L   -4  -6 -11 -13  -4  -6 -10 -12  -7   3  10  -8   3   1  -9  -9  -6  -4  -5   0
K   -3   4  -1  -2 -12   2   1  -7  -2  -8  -8  12  -5 -11  -4  -2  -2 -11  -7  -9
M   -3  -5  -7 -11  -4  -2  -7  -9  -6   2   3  -5  16  -1  -9  -5  -4  -3  -3  -1
F   -6  -9  -9 -13  -4  -9 -12 -10  -4  -1   1 -11  -1  14  -8  -8  -6   1   4  -3
P   -3  -6  -5  -5 -11  -4  -4  -5  -7  -8  -9  -4  -9  -8  16  -3  -4 -11  -8  -6
S    0  -3   0  -1  -3  -2  -2  -2  -4  -8  -9  -2  -5  -8  -3  11   3  -9  -6  -7
T   -3  -4  -2  -3  -5  -2  -3  -6  -5  -4  -6  -2  -4  -6  -4   3  12  -7  -5  -2
W   -8  -6 -10 -12  -6  -8 -11 -11  -4  -6  -4 -11  -3   1 -11  -9  -7  21   3  -8
Y   -6  -4  -4  -9  -5  -5  -8 -10   1  -6  -5  -7  -3   4  -8  -6  -5   3  15  -5
V   -1  -8 -10 -14  -3  -7  -8 -11  -8   5   0  -9  -1  -3  -6  -7  -2  -8  -5  10