Tableau information
Concept source: d1ttua1 amino acid (a.a.) range (ALA596)(THR629)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: EEEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ALA596) (GLU600) E1
(GLU600) (SER605) E2
(SER608) (SER612) E3
(THR624) (THR629) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 -65.2° E2
E3 105.4° 165.7° E3
H4 -74.8° 49.1° -119.5°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3bpob2 : (LYS97) (LEU132) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1i8dc1 : (GLY8) (ASP34) [view usage] : b.43.4.3 |Reductase/isomerase/elongation factor common domain |Riboflavin synthase domain-like |Riboflavin synthase |Riboflavin synthase |Escherichia coli [TaxId: 562]
d3g7nb_ : (PHE180) (SER244) [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Penicillium expansum [TaxId: 27334]
d4esrb_ : (ILE1077) (GLU1114) [view usage] : b.34.2.0 |SH3-like barrel |SH3-domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2p8ra_ : (GLN2131) (PHE2165) [view usage] : c.97.3.1 |Cytidine deaminase-like |JAB1/MPN domain |JAB1/MPN domain |Splicing factor Prp8 C-terminal domain |Nematode (Caenorhabditis elegans) [TaxId: 6239]
d4f7db1 : (LYS18) (ASN48) [view usage] : b.43.4.0 |Reductase/isomerase/elongation factor common domain |Riboflavin synthase domain-like |automated matches |automated matches |Burkholderia thailandensis [TaxId: 271848]
d3ob9d_ : (ASP32) (LYS89) [view usage] : b.34.13.0 |SH3-like barrel |Chromo domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1j0sa_ : (GLY122) (ASP146) [view usage] : b.42.1.2 |beta-Trefoil |Cytokine |Interleukin-1 (IL-1) |Interleukin-18 |Human (Homo sapiens) [TaxId: 9606]
d2oj6c2 : (TYR347) (GLU384) [view usage] : b.21.1.2 |Virus attachment protein globular domain |Virus attachment protein globular domain |Reovirus attachment protein sigma 1 head domain |automated matches |Reovirus sp. [TaxId: 10891]
d1b4oa_ : (LYS20) (MET57) [view usage] : b.34.13.1 |SH3-like barrel |Chromo domain-like |"Histone-like" proteins from archaea |DNA-binding protein |Sulfolobus solfataricus, Sso7d [TaxId: 2287]
d1gqea_ : (GLY160) (LEU192) [view usage] : e.38.1.1 |Release factor |Release factor |Release factor |Polypeptide chain release factor 2 (RF2) |Escherichia coli [TaxId: 562]
d1b8aa2 : (GLY155) (GLY202) [view usage] : d.104.1.1 |Class II aaRS and biotin synthetases |Class II aaRS and biotin synthetases |Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain |Aspartyl-tRNA synthetase (AspRS) |Pyrococcus kodakaraensis [TaxId: 311400]
d2as9a_ : (GLY63) (VAL102) [view usage] : b.47.1.0 |Trypsin-like serine proteases |Trypsin-like serine proteases |automated matches |automated matches |Staphylococcus aureus [TaxId: 1280]
d2p87a_ : (GLN2131) (PHE2165) [view usage] : c.97.3.1 |Cytidine deaminase-like |JAB1/MPN domain |JAB1/MPN domain |Splicing factor Prp8 C-terminal domain |Nematode (Caenorhabditis elegans) [TaxId: 6239]
d1ttua1 : (ALA596) (THR629) [view usage] : b.1.18.1 |Immunoglobulin-like beta-sandwich |E set domains |NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain |DNA-binding protein LAG-1 (CSL) |Nematode (Caenorhabditis elegans) [TaxId: 6239]
d3og8b_ : (GLU883) (GLU927) [view usage] : b.88.2.1 |Mss4-like |RIG-I C-terminal-like |RIG-I C-terminal domain-like |RIG-I C-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d4fk8a1 : (LYS18) (ASN48) [view usage] : b.43.4.0 |Reductase/isomerase/elongation factor common domain |Riboflavin synthase domain-like |automated matches |automated matches |Burkholderia thailandensis [TaxId: 271848]
d3d23b_ : (SER24) (GLU51) [view usage] : b.47.1.4 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral cysteine protease of trypsin fold |Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) |Human coronavirus [TaxId: 443239]
d3hpea_ : (THR41) (THR86) [view usage] : b.61.6.0 |Streptavidin-like |YceI-like |automated matches |automated matches |Helicobacter pylori [TaxId: 210]
d1a4kb1 : (GLN3) (ASN31) [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Mouse (Mus musculus), cluster 4 [TaxId: 10090]
d2xuma_ : (ALA198) (ASP237) [view usage] : b.82.2.6 |Double-stranded beta-helix |Clavaminate synthase-like |Hypoxia-inducible factor HIF ihhibitor (FIH1) |Hypoxia-inducible factor HIF ihhibitor (FIH1) |Human (Homo sapiens) [TaxId: 9606]
d2oj5c2 : (TYR347) (GLU384) [view usage] : b.21.1.2 |Virus attachment protein globular domain |Virus attachment protein globular domain |Reovirus attachment protein sigma 1 head domain |automated matches |Reovirus sp. [TaxId: 10891]
d3fdra_ : (ARG46) (PRO87) [view usage] : b.34.9.1 |SH3-like barrel |Tudor/PWWP/MBT |Tudor domain |Tudor and KH domain-containing protein TDRKH |Human (Homo sapiens) [TaxId: 9606]
d1wuba_ : (ILE21) (ARG67) [view usage] : b.61.6.1 |Streptavidin-like |YceI-like |YceI-like |Polyisoprenoid-binding protein TTHA0802 (TT1927B) |Thermus thermophilus [TaxId: 274]
d2xyqb_ : (CYS41) (HIS80) [view usage] : g.86.1.1 |Coronavirus NSP10-like |Coronavirus NSP10-like |Coronavirus NSP10-like |automated matches |SARS coronavirus [TaxId: 227859]
d1nf3c_ : (GLY170) (GLY207) [view usage] : b.36.1.1 |PDZ domain-like |PDZ domain-like |PDZ domain |GTPase-binding domain of the cell polarity protein par6 (Par-6B) |Mouse (Mus musculus) [TaxId: 10090]
d1dlma_ : (GLY219) (TYR255) [view usage] : b.3.6.1 |Prealbumin-like |Aromatic compound dioxygenase |Aromatic compound dioxygenase |Catechol 1,2-dioxygenase |Acinetobacter calcoaceticus [TaxId: 471]
d3bplb2 : (LYS97) (LEU132) [view usage] : b.1.2.1 |Immunoglobulin-like beta-sandwich |Fibronectin type III |Fibronectin type III |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1mi2a_ : (GLN24) (LYS69) [view usage] : d.9.1.1 |IL8-like |Interleukin 8-like chemokines |Interleukin 8-like chemokines |Macrophage inflammatory protein-2 |Mouse (Mus musculus) [TaxId: 10090]
d3r24b_ : (CYS41) (HIS80) [view usage] : g.86.1.1 |Coronavirus NSP10-like |Coronavirus NSP10-like |Coronavirus NSP10-like |automated matches |SARS coronavirus [TaxId: 227859]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.82, c.69, b.47, d.104, b.1, c.97, b.42, b.21, b.34, b.61, b.43, b.3, b.88, e.38, b.36, d.9, g.86